Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC6A12P48065 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC6A12P48065 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC6A12P48065 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC6A12P48065 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC6A12P48065 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC6A12P48065 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC6A12P48065 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC6A12P48065 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC6A12P48065 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC6A12P48065 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC6A12P48065 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 AL590627.1-203ENST00000421194 1026 ntBASIC16.07■□□□□ 0.16
SLC6A12P48065 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 SLC25A1P1-201ENST00000528351 927 ntBASIC16.07■□□□□ 0.16
SLC6A12P48065 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC6A12P48065 AC109635.5-201ENST00000533593 962 ntBASIC16.07■□□□□ 0.16
SLC6A12P48065 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC6A12P48065 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC6A12P48065 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC6A12P48065 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC6A12P48065 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC6A12P48065 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SLC6A12P48065 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SLC6A12P48065 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC6A12P48065 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
SLC6A12P48065 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SLC6A12P48065 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC6A12P48065 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 AC018695.7-201ENST00000624587 2492 ntBASIC16.06■□□□□ 0.16
SLC6A12P48065 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SLC6A12P48065 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 AL513523.2-202ENST00000427283 2040 ntBASIC16.06■□□□□ 0.16
SLC6A12P48065 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC6A12P48065 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SLC6A12P48065 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC6A12P48065 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC6A12P48065 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC6A12P48065 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC6A12P48065 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC6A12P48065 AC018845.2-201ENST00000568326 409 ntBASIC16.06■□□□□ 0.16
SLC6A12P48065 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SLC6A12P48065 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC6A12P48065 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC6A12P48065 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC6A12P48065 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC6A12P48065 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SLC6A12P48065 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A12P48065 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SLC6A12P48065 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SLC6A12P48065 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLC6A12P48065 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A12P48065 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms