Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
XPAP23025 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
XPAP23025 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.84■□□□□ 0.29
XPAP23025 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
XPAP23025 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
XPAP23025 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
XPAP23025 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
XPAP23025 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
XPAP23025 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
XPAP23025 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
XPAP23025 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
XPAP23025 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
XPAP23025 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.28
XPAP23025 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
XPAP23025 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 RNU1-129P-201ENST00000384064 167 ntBASIC16.83■□□□□ 0.28
XPAP23025 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
XPAP23025 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
XPAP23025 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.83■□□□□ 0.28
XPAP23025 PMS2P4-201ENST00000412466 1052 ntBASIC16.83■□□□□ 0.28
XPAP23025 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.83■□□□□ 0.28
XPAP23025 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.83■□□□□ 0.28
XPAP23025 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.83■□□□□ 0.28
XPAP23025 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.83■□□□□ 0.28
XPAP23025 DNAJB3-202ENST00000449667 1266 ntBASIC16.83■□□□□ 0.28
XPAP23025 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
XPAP23025 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.83■□□□□ 0.28
XPAP23025 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.83■□□□□ 0.28
XPAP23025 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.83■□□□□ 0.28
XPAP23025 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.83■□□□□ 0.28
XPAP23025 PCDHB17P-201ENST00000539533 2393 ntBASIC16.83■□□□□ 0.28
XPAP23025 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.83■□□□□ 0.28
XPAP23025 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
XPAP23025 AP001094.4-201ENST00000579008 2176 ntBASIC16.83■□□□□ 0.28
XPAP23025 U1.21-201ENST00000580816 167 ntBASIC16.83■□□□□ 0.28
XPAP23025 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.83■□□□□ 0.28
XPAP23025 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.83■□□□□ 0.28
XPAP23025 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.83■□□□□ 0.28
XPAP23025 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.83■□□□□ 0.28
XPAP23025 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.83■□□□□ 0.28
XPAP23025 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
XPAP23025 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.83■□□□□ 0.28
XPAP23025 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
XPAP23025 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
XPAP23025 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.82■□□□□ 0.28
XPAP23025 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.82■□□□□ 0.28
XPAP23025 AC006277.1-201ENST00000624348 1610 ntBASIC16.82■□□□□ 0.28
XPAP23025 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.82■□□□□ 0.28
XPAP23025 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
XPAP23025 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.82■□□□□ 0.28
XPAP23025 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
XPAP23025 AC254562.1-201ENST00000417586 456 ntBASIC16.82■□□□□ 0.28
XPAP23025 AP006288.1-201ENST00000446065 395 ntBASIC16.82■□□□□ 0.28
XPAP23025 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.82■□□□□ 0.28
XPAP23025 SPDYE11-202ENST00000450699 704 ntBASIC16.82■□□□□ 0.28
XPAP23025 TIMM8BP1-201ENST00000452384 211 ntBASIC16.82■□□□□ 0.28
XPAP23025 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.82■□□□□ 0.28
XPAP23025 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.82■□□□□ 0.28
XPAP23025 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
XPAP23025 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
XPAP23025 SPDYE9P-201ENST00000570642 692 ntBASIC16.82■□□□□ 0.28
XPAP23025 MIR4492-201ENST00000581627 80 ntBASIC16.82■□□□□ 0.28
XPAP23025 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
XPAP23025 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms