Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.89■□□□□ 0.29
AP3B1O00203 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.89■□□□□ 0.29
AP3B1O00203 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.89■□□□□ 0.29
AP3B1O00203 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.89■□□□□ 0.29
AP3B1O00203 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.89■□□□□ 0.29
AP3B1O00203 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.89■□□□□ 0.29
AP3B1O00203 AC012313.10-201ENST00000623509 926 ntBASIC16.89■□□□□ 0.29
AP3B1O00203 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.89■□□□□ 0.29
AP3B1O00203 ALOX12P2-203ENST00000570921 1945 ntBASIC16.89■□□□□ 0.29
AP3B1O00203 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
AP3B1O00203 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.89■□□□□ 0.29
AP3B1O00203 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.89■□□□□ 0.29
AP3B1O00203 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.89■□□□□ 0.29
AP3B1O00203 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
AP3B1O00203 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.89■□□□□ 0.29
AP3B1O00203 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.89■□□□□ 0.29
AP3B1O00203 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.89■□□□□ 0.29
AP3B1O00203 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.89■□□□□ 0.29
AP3B1O00203 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
AP3B1O00203 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP3B1O00203 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.88■□□□□ 0.29
AP3B1O00203 AL671710.1-201ENST00000610245 2349 ntBASIC16.88■□□□□ 0.29
AP3B1O00203 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
AP3B1O00203 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
AP3B1O00203 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.88■□□□□ 0.29
AP3B1O00203 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.88■□□□□ 0.29
AP3B1O00203 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3B1O00203 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.88■□□□□ 0.29
AP3B1O00203 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3B1O00203 GGT4P-201ENST00000623672 1708 ntBASIC16.88■□□□□ 0.29
AP3B1O00203 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP3B1O00203 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP3B1O00203 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3B1O00203 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3B1O00203 AC026691.1-201ENST00000602502 2017 ntBASIC16.88■□□□□ 0.29
AP3B1O00203 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
AP3B1O00203 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.88■□□□□ 0.29
AP3B1O00203 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.88■□□□□ 0.29
AP3B1O00203 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.88■□□□□ 0.29
AP3B1O00203 FAAHP1-202ENST00000446499 1238 ntBASIC16.88■□□□□ 0.29
AP3B1O00203 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
AP3B1O00203 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.88■□□□□ 0.29
AP3B1O00203 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.88■□□□□ 0.29
AP3B1O00203 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
AP3B1O00203 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.88■□□□□ 0.29
AP3B1O00203 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.88■□□□□ 0.29
AP3B1O00203 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
AP3B1O00203 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP3B1O00203 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP3B1O00203 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3B1O00203 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP3B1O00203 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3B1O00203 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.88■□□□□ 0.29
AP3B1O00203 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
AP3B1O00203 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3B1O00203 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
AP3B1O00203 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
AP3B1O00203 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
AP3B1O00203 GPAA1P2-202ENST00000606848 1787 ntBASIC16.87■□□□□ 0.29
AP3B1O00203 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
AP3B1O00203 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3B1O00203 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3B1O00203 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
AP3B1O00203 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.87■□□□□ 0.29
AP3B1O00203 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
AP3B1O00203 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.87■□□□□ 0.29
AP3B1O00203 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3B1O00203 DUSP5P1-201ENST00000441325 1139 ntBASIC16.87■□□□□ 0.29
AP3B1O00203 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3B1O00203 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.87■□□□□ 0.29
AP3B1O00203 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.87■□□□□ 0.29
AP3B1O00203 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3B1O00203 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3B1O00203 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3B1O00203 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3B1O00203 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3B1O00203 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3B1O00203 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3B1O00203 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms