Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 AC105233.2-201ENST00000523697 349 ntBASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 AF228730.5-201ENST00000530288 346 ntBASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 MIR4745-201ENST00000577608 62 ntBASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 FO538757.1-201ENST00000623083 1397 ntBASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TBC1D3FA6NER0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TBC1D3FA6NER0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 MIR4453-201ENST00000584019 89 ntBASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 AJ011932.1-201ENST00000621707 465 ntBASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 PCDHB17P-201ENST00000539533 2393 ntBASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3FA6NER0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 AC069120.2-201ENST00000524091 540 ntBASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 AC013467.2-201ENST00000605472 835 ntBASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3FA6NER0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms