Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.74■■□□□ 1.39
PPP4R1Q8TF05 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PPP4R1Q8TF05 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP4R1Q8TF05 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP4R1Q8TF05 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP4R1Q8TF05 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP4R1Q8TF05 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP4R1Q8TF05 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.73■■□□□ 1.39
PPP4R1Q8TF05 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PPP4R1Q8TF05 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP4R1Q8TF05 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.73■■□□□ 1.39
PPP4R1Q8TF05 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 GPX1-201ENST00000419349 1106 ntBASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R1Q8TF05 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R1Q8TF05 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.71■■□□□ 1.39
PPP4R1Q8TF05 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
PPP4R1Q8TF05 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.71■■□□□ 1.39
PPP4R1Q8TF05 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
PPP4R1Q8TF05 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PPP4R1Q8TF05 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R1Q8TF05 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R1Q8TF05 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R1Q8TF05 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R1Q8TF05 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.7■■□□□ 1.38
PPP4R1Q8TF05 AC096887.2-201ENST00000623443 1957 ntBASIC23.7■■□□□ 1.38
PPP4R1Q8TF05 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R1Q8TF05 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R1Q8TF05 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.69■■□□□ 1.38
PPP4R1Q8TF05 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R1Q8TF05 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R1Q8TF05 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
PPP4R1Q8TF05 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R1Q8TF05 AL359504.2-201ENST00000605506 1601 ntBASIC23.69■■□□□ 1.38
PPP4R1Q8TF05 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.69■■□□□ 1.38
PPP4R1Q8TF05 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PPP4R1Q8TF05 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.68■■□□□ 1.38
PPP4R1Q8TF05 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.68■■□□□ 1.38
PPP4R1Q8TF05 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PPP4R1Q8TF05 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.68■■□□□ 1.38
PPP4R1Q8TF05 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.68■■□□□ 1.38
PPP4R1Q8TF05 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PPP4R1Q8TF05 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PPP4R1Q8TF05 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.68■■□□□ 1.38
PPP4R1Q8TF05 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.68■■□□□ 1.38
PPP4R1Q8TF05 RNF126P1-201ENST00000567452 1320 ntBASIC23.67■■□□□ 1.38
PPP4R1Q8TF05 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.67■■□□□ 1.38
PPP4R1Q8TF05 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R1Q8TF05 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PPP4R1Q8TF05 ABHD17AP5-201ENST00000580133 923 ntBASIC23.67■■□□□ 1.38
PPP4R1Q8TF05 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
PPP4R1Q8TF05 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.67■■□□□ 1.38
PPP4R1Q8TF05 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R1Q8TF05 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R1Q8TF05 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R1Q8TF05 AC126177.7-201ENST00000547904 679 ntBASIC23.66■■□□□ 1.38
PPP4R1Q8TF05 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R1Q8TF05 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.65■■□□□ 1.38
PPP4R1Q8TF05 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R1Q8TF05 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R1Q8TF05 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.65■■□□□ 1.38
PPP4R1Q8TF05 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R1Q8TF05 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R1Q8TF05 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PPP4R1Q8TF05 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PPP4R1Q8TF05 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PPP4R1Q8TF05 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PPP4R1Q8TF05 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PPP4R1Q8TF05 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PPP4R1Q8TF05 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PPP4R1Q8TF05 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R1Q8TF05 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.63■■□□□ 1.37
PPP4R1Q8TF05 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R1Q8TF05 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R1Q8TF05 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R1Q8TF05 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.63■■□□□ 1.37
PPP4R1Q8TF05 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PPP4R1Q8TF05 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R1Q8TF05 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R1Q8TF05 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms