Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 ARG81YML099C 2643 nt6.32□□□□□ -1.4
DNL4Q08387 RAD24YER173W 1980 nt6.31□□□□□ -1.4
DNL4Q08387 AFG1YEL052W 1530 nt6.31□□□□□ -1.4
DNL4Q08387 CDC19YAL038W 1503 nt6.31□□□□□ -1.4
DNL4Q08387 YGL235WYGL235W 537 nt6.31□□□□□ -1.4
DNL4Q08387 DMA1YHR115C 1251 nt6.31□□□□□ -1.4
DNL4Q08387 RHO4YKR055W 876 nt6.31□□□□□ -1.4
DNL4Q08387 YML6YML025C 861 nt6.31□□□□□ -1.4
DNL4Q08387 MRP51YPL118W 1035 nt6.31□□□□□ -1.4
DNL4Q08387 ATG12YBR217W 561 nt6.31□□□□□ -1.4
DNL4Q08387 PGM1YKL127W 1713 nt6.3□□□□□ -1.4
DNL4Q08387 PYC2YBR218C 3543 nt6.3□□□□□ -1.4
DNL4Q08387 GEP5YLR091W 882 nt6.3□□□□□ -1.4
DNL4Q08387 YHM2YMR241W 945 nt6.3□□□□□ -1.4
DNL4Q08387 MRPS12YNR036C 462 nt6.3□□□□□ -1.4
DNL4Q08387 AAD15YOL165C 432 nt6.3□□□□□ -1.4
DNL4Q08387 GPB2YAL056W 2643 nt6.3□□□□□ -1.4
DNL4Q08387 MRK1YDL079C 1506 nt6.3□□□□□ -1.4
DNL4Q08387 HST3YOR025W 1344 nt6.29□□□□□ -1.4
DNL4Q08387 MPA43YNL249C 1629 nt6.29□□□□□ -1.4
DNL4Q08387 PUF3YLL013C 2640 nt6.29□□□□□ -1.4
DNL4Q08387 BSC4YNL269W 396 nt6.29□□□□□ -1.4
DNL4Q08387 TEL2YGR099W 2067 nt6.29□□□□□ -1.4
DNL4Q08387 GFA1YKL104C 2154 nt6.28□□□□□ -1.4
DNL4Q08387 YOL036WYOL036W 2286 nt6.28□□□□□ -1.4
DNL4Q08387 DUG1YFR044C 1446 nt6.28□□□□□ -1.4
DNL4Q08387 YDL119CYDL119C 924 nt6.28□□□□□ -1.4
DNL4Q08387 SNO4YMR322C 714 nt6.28□□□□□ -1.4
DNL4Q08387 HSP33YOR391C 714 nt6.28□□□□□ -1.4
DNL4Q08387 HSP32YPL280W 714 nt6.28□□□□□ -1.4
DNL4Q08387 EHD3YDR036C 1503 nt6.27□□□□□ -1.41
DNL4Q08387 ICS3YJL077C 396 nt6.27□□□□□ -1.41
DNL4Q08387 RPE1YJL121C 717 nt6.27□□□□□ -1.41
DNL4Q08387 OAC1YKL120W 975 nt6.27□□□□□ -1.41
DNL4Q08387 RPL10YLR075W 666 nt6.27□□□□□ -1.41
DNL4Q08387 YMR119W-AYMR119W-A 375 nt6.27□□□□□ -1.41
DNL4Q08387 IDP3YNL009W 1263 nt6.27□□□□□ -1.41
DNL4Q08387 DAP1YPL170W 459 nt6.27□□□□□ -1.41
DNL4Q08387 CIT3YPR001W 1461 nt6.27□□□□□ -1.41
DNL4Q08387 CBP4YGR174C 513 nt6.26□□□□□ -1.41
DNL4Q08387 SSP120YLR250W 705 nt6.26□□□□□ -1.41
DNL4Q08387 GUD1YDL238C 1470 nt6.26□□□□□ -1.41
DNL4Q08387 CRZ1YNL027W 2037 nt6.25□□□□□ -1.41
DNL4Q08387 tR(ACG)DtR(ACG)D 73 nt6.25□□□□□ -1.41
DNL4Q08387 tR(ACG)EtR(ACG)E 73 nt6.25□□□□□ -1.41
DNL4Q08387 tR(ACG)KtR(ACG)K 73 nt6.25□□□□□ -1.41
DNL4Q08387 tR(ACG)LtR(ACG)L 73 nt6.25□□□□□ -1.41
DNL4Q08387 tR(ACG)OtR(ACG)O 73 nt6.25□□□□□ -1.41
DNL4Q08387 RPR2YIR015W 435 nt6.25□□□□□ -1.41
DNL4Q08387 ELA1YNL230C 1140 nt6.25□□□□□ -1.41
DNL4Q08387 UBC11YOR339C 471 nt6.25□□□□□ -1.41
DNL4Q08387 ATG4YNL223W 1485 nt6.24□□□□□ -1.41
DNL4Q08387 MRC1YCL061C 3291 nt6.24□□□□□ -1.41
DNL4Q08387 CRP1YHR146W 1398 nt6.24□□□□□ -1.41
DNL4Q08387 VPS61YDR136C 573 nt6.24□□□□□ -1.41
DNL4Q08387 YIR042CYIR042C 711 nt6.24□□□□□ -1.41
DNL4Q08387 STE13YOR219C 2796 nt6.24□□□□□ -1.41
DNL4Q08387 SCT1YBL011W 2280 nt6.24□□□□□ -1.41
DNL4Q08387 PDR18YNR070W 4002 nt6.23□□□□□ -1.41
DNL4Q08387 RHB1YCR027C 630 nt6.23□□□□□ -1.41
DNL4Q08387 SHO1YER118C 1104 nt6.23□□□□□ -1.41
DNL4Q08387 PHB1YGR132C 864 nt6.23□□□□□ -1.41
DNL4Q08387 GLN1YPR035W 1113 nt6.23□□□□□ -1.41
DNL4Q08387 STB5YHR178W 2232 nt6.22□□□□□ -1.41
DNL4Q08387 MDH3YDL078C 1032 nt6.22□□□□□ -1.41
DNL4Q08387 BRL1YHR036W 1416 nt6.22□□□□□ -1.41
DNL4Q08387 MCM6YGL201C 3054 nt6.22□□□□□ -1.41
DNL4Q08387 COA1YIL157C 594 nt6.21□□□□□ -1.42
DNL4Q08387 MRPL22YNL177C 930 nt6.21□□□□□ -1.42
DNL4Q08387 KKQ8YKL168C 2175 nt6.21□□□□□ -1.42
DNL4Q08387 RPT3YDR394W 1287 nt6.2□□□□□ -1.42
DNL4Q08387 DUS4YLR405W 1104 nt6.2□□□□□ -1.42
DNL4Q08387 YBR144CYBR144C 315 nt6.2□□□□□ -1.42
DNL4Q08387 YBR226CYBR226C 411 nt6.2□□□□□ -1.42
DNL4Q08387 YDR514CYDR514C 1452 nt6.18□□□□□ -1.42
DNL4Q08387 COX9YDL067C 180 nt6.18□□□□□ -1.42
DNL4Q08387 YDR278CYDR278C 318 nt6.18□□□□□ -1.42
DNL4Q08387 YGR022CYGR022C 330 nt6.18□□□□□ -1.42
DNL4Q08387 CNE1YAL058W 1509 nt6.18□□□□□ -1.42
DNL4Q08387 HSP104YLL026W 2727 nt6.17□□□□□ -1.42
DNL4Q08387 SUP19tS(UGA)E 82 nt6.17□□□□□ -1.42
DNL4Q08387 SUP17tS(UGA)I 82 nt6.17□□□□□ -1.42
DNL4Q08387 SUP16tS(UGA)P 82 nt6.17□□□□□ -1.42
DNL4Q08387 YNR075C-AYNR075C-A 93 nt6.17□□□□□ -1.42
DNL4Q08387 IME2YJL106W 1938 nt6.17□□□□□ -1.42
DNL4Q08387 ATP4YPL078C 735 nt6.16□□□□□ -1.42
DNL4Q08387 TRP5YGL026C 2124 nt6.16□□□□□ -1.42
DNL4Q08387 ALT1YLR089C 1779 nt6.16□□□□□ -1.42
DNL4Q08387 YIR007WYIR007W 2295 nt6.15□□□□□ -1.42
DNL4Q08387 PAN6YIL145C 930 nt6.15□□□□□ -1.42
DNL4Q08387 MRP17YKL003C 396 nt6.15□□□□□ -1.42
DNL4Q08387 TEP1YNL128W 1305 nt6.15□□□□□ -1.43
DNL4Q08387 OXP1YKL215C 3861 nt6.15□□□□□ -1.43
DNL4Q08387 FAT3YKL187C 2253 nt6.14□□□□□ -1.43
DNL4Q08387 GEX1YCL073C 1848 nt6.14□□□□□ -1.43
DNL4Q08387 GEX2YKR106W 1848 nt6.14□□□□□ -1.43
DNL4Q08387 CDC16YKL022C 2523 nt6.14□□□□□ -1.43
DNL4Q08387 MAK32YCR019W 1092 nt6.14□□□□□ -1.43
DNL4Q08387 YCR047W-AYCR047W-A 207 nt6.14□□□□□ -1.43
DNL4Q08387 MOD5YOR274W 1287 nt6.14□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms