Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 PFN1P12-201ENST00000455938 534 ntBASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 AC025048.3-201ENST00000590609 569 ntBASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 AL022328.1-201ENST00000610050 478 ntBASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 AC005702.4-201ENST00000618393 416 ntBASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 MIR6069-201ENST00000620069 79 ntBASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ARFGEF1Q9Y6D6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 ELK2AP-201ENST00000392510 1007 ntBASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 DUX4L45-201ENST00000566406 1057 ntBASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 AC026979.3-201ENST00000607315 403 ntBASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF1Q9Y6D6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 IGHJ2P-201ENST00000454480 60 ntBASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 MIR3615-201ENST00000581999 87 ntBASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 BTNL10-201ENST00000595971 695 ntBASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 AL138688.1-201ENST00000624851 1594 ntBASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF1Q9Y6D6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 FTH1P14-201ENST00000482930 551 ntBASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 AC068587.3-201ENST00000526613 355 ntBASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 RN7SL190P-201ENST00000582519 257 ntBASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 AC134043.2-201ENST00000624206 2238 ntBASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms