Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP13A1Q9HD20 ELL2P1-201ENST00000413990 1906 ntBASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 ACTG1P14-201ENST00000446382 1122 ntBASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 CEND1P1-201ENST00000451006 455 ntBASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 YBX1P5-201ENST00000509441 847 ntBASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 AC109635.5-201ENST00000533593 962 ntBASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 AC139530.3-201ENST00000620344 690 ntBASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 AC055717.3-201ENST00000622967 595 ntBASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ATP13A1Q9HD20 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ATP13A1Q9HD20 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 PMS2P4-201ENST00000412466 1052 ntBASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 AC211486.1-202ENST00000416371 468 ntBASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 AC211476.1-201ENST00000503899 468 ntBASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 MIR3909-201ENST00000579518 119 ntBASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 AC099522.2-201ENST00000607001 744 ntBASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 GPALPP1-207ENST00000611650 899 ntBASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 AC006538.3-201ENST00000612495 578 ntBASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 CROCCP1-201ENST00000426910 5675 ntBASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 AL603756.1-201ENST00000606511 2163 ntBASIC17.08■□□□□ 0.32
ATP13A1Q9HD20 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms