Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 ME2P1-201ENST00000426028 1970 ntBASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 AP001269.4-201ENST00000609611 512 ntBASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 AC092119.3-201ENST00000612618 583 ntBASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 AL358472.4-201ENST00000633140 710 ntBASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 AL139424.1-201ENST00000607572 797 ntBASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 PAUPAR-201ENST00000630360 2965 ntBASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
POLR2J3Q9H1A7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms