Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 AL512652.2-201ENST00000625156 1716 ntBASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 AC080080.1-201ENST00000625121 2420 ntBASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 AC012313.1-201ENST00000593393 3059 ntBASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 HLA-A-202ENST00000376806 1854 ntBASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 RPSAP43-201ENST00000402237 625 ntBASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 AC010327.4-202ENST00000591484 748 ntBASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 AC099522.2-201ENST00000607001 744 ntBASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 GPAA1P2-202ENST00000606848 1787 ntBASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM62Q9BVG3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 AC022211.2-201ENST00000585075 2527 ntBASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 AC106886.4-201ENST00000623557 2502 ntBASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 AL671277.1-201ENST00000429656 993 ntBASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM62Q9BVG3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 MIR1233-2-201ENST00000408138 82 ntBASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 MIR1233-1-201ENST00000408722 82 ntBASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 ALG1L5P-201ENST00000482043 771 ntBASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM62Q9BVG3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms