Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 FUK-207ENST00000571514 3054 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 GCK-209ENST00000616242 2260 ntTSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LIMD2Q9BT23 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 AC016734.2-201ENST00000624325 1377 ntBASIC10.03□□□□□ -0.8
LIMD2Q9BT23 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 RNF146-204ENST00000476956 884 ntTSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 PTK2-216ENST00000519881 863 ntTSL 3 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 AP002414.4-201ENST00000589764 1148 ntBASIC10.03□□□□□ -0.8
LIMD2Q9BT23 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC10.03□□□□□ -0.8
LIMD2Q9BT23 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 AL353593.2-201ENST00000602529 1483 ntBASIC10.03□□□□□ -0.8
LIMD2Q9BT23 TP73-AS1-210ENST00000637775 1455 ntBASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 LINC02199-201ENST00000506655 2702 ntBASIC10.03□□□□□ -0.8
LIMD2Q9BT23 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms