Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 AC002347.1-201ENST00000569543 541 ntBASIC17.68■□□□□ 0.42
UBA3Q8TBC4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 AL031055.1-201ENST00000606362 631 ntBASIC17.68■□□□□ 0.42
UBA3Q8TBC4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.68■□□□□ 0.42
UBA3Q8TBC4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 AP002472.1-201ENST00000577490 586 ntBASIC17.67■□□□□ 0.42
UBA3Q8TBC4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 AC068137.2-201ENST00000605408 478 ntBASIC17.67■□□□□ 0.42
UBA3Q8TBC4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
UBA3Q8TBC4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 YBX2P1-201ENST00000394192 760 ntBASIC17.66■□□□□ 0.42
UBA3Q8TBC4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 AC004832.2-201ENST00000426397 482 ntBASIC17.66■□□□□ 0.42
UBA3Q8TBC4 AC140658.5-201ENST00000438532 169 ntBASIC17.66■□□□□ 0.42
UBA3Q8TBC4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBA3Q8TBC4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 AL031731.1-201ENST00000642131 2094 ntBASIC17.65■□□□□ 0.42
UBA3Q8TBC4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 ALOX12P2-203ENST00000570921 1945 ntBASIC17.65■□□□□ 0.42
UBA3Q8TBC4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA3Q8TBC4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms