Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP61Q8NHU2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP61Q8NHU2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP61Q8NHU2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CFAP61Q8NHU2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP61Q8NHU2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CFAP61Q8NHU2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP61Q8NHU2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP61Q8NHU2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP61Q8NHU2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.03■□□□□ 0.32
CFAP61Q8NHU2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CFAP61Q8NHU2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 SPDYE21P-201ENST00000413323 827 ntBASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 RBM17P3-201ENST00000417687 1192 ntBASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 RN7SL510P-201ENST00000581311 263 ntBASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 AL355877.3-201ENST00000622820 899 ntBASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CFAP61Q8NHU2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP61Q8NHU2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.02■□□□□ 0.31
CFAP61Q8NHU2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
CFAP61Q8NHU2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP61Q8NHU2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP61Q8NHU2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 AC079776.2-201ENST00000641154 1609 ntBASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 SIGLEC30P-201ENST00000455569 941 ntBASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 NKAPP1-205ENST00000585790 367 ntBASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP61Q8NHU2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms