Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC004832.2-201ENST00000426397 482 ntBASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 AP002472.1-201ENST00000577490 586 ntBASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 HLA-J-202ENST00000469281 1241 ntBASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 AC068137.2-201ENST00000605408 478 ntBASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCUBE3Q8IX30 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 AL031731.1-201ENST00000642131 2094 ntBASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 PMS2P4-201ENST00000412466 1052 ntBASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 MCCD1P2-201ENST00000423228 335 ntBASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 AL009183.1-201ENST00000603760 355 ntBASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 AL031055.1-201ENST00000606362 631 ntBASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCUBE3Q8IX30 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms