Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 AL450487.1-201ENST00000426799 995 ntBASIC15.5■□□□□ 0.07
TUBA1AQ71U36 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 KRT126P-201ENST00000549467 1181 ntBASIC15.5■□□□□ 0.07
TUBA1AQ71U36 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 AC114341.1-201ENST00000618070 349 ntBASIC15.5■□□□□ 0.07
TUBA1AQ71U36 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.5■□□□□ 0.07
TUBA1AQ71U36 MTHFR-217ENST00000641820 1569 ntBASIC15.49■□□□□ 0.07
TUBA1AQ71U36 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 MIR5100-201ENST00000579544 119 ntBASIC15.49■□□□□ 0.07
TUBA1AQ71U36 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 AL121894.2-201ENST00000602977 491 ntBASIC15.49■□□□□ 0.07
TUBA1AQ71U36 AL591684.3-201ENST00000605187 298 ntBASIC15.49■□□□□ 0.07
TUBA1AQ71U36 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBA1AQ71U36 AC092364.2-201ENST00000596710 2692 ntBASIC15.49■□□□□ 0.07
TUBA1AQ71U36 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TUBA1AQ71U36 POM121L3P-201ENST00000419331 1163 ntBASIC15.48■□□□□ 0.07
TUBA1AQ71U36 AC096633.1-201ENST00000422446 749 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms