Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ShbQ6PD21 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShbQ6PD21 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShbQ6PD21 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
ShbQ6PD21 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShbQ6PD21 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ShbQ6PD21 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.61□□□□□ -0.07
ShbQ6PD21 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ShbQ6PD21 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.61□□□□□ -0.07
ShbQ6PD21 Gm44405-201ENSMUST00000198952 126 ntBASIC14.61□□□□□ -0.07
ShbQ6PD21 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.61□□□□□ -0.07
ShbQ6PD21 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ShbQ6PD21 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.61□□□□□ -0.07
ShbQ6PD21 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShbQ6PD21 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ShbQ6PD21 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.6□□□□□ -0.07
ShbQ6PD21 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ShbQ6PD21 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ShbQ6PD21 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.6□□□□□ -0.07
ShbQ6PD21 Gm14109-201ENSMUST00000118814 309 ntBASIC14.6□□□□□ -0.07
ShbQ6PD21 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.6□□□□□ -0.07
ShbQ6PD21 Gm9550-201ENSMUST00000161130 862 ntBASIC14.6□□□□□ -0.07
ShbQ6PD21 Gm27046-201ENSMUST00000182160 463 ntBASIC14.6□□□□□ -0.07
ShbQ6PD21 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.6□□□□□ -0.07
ShbQ6PD21 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.6□□□□□ -0.07
ShbQ6PD21 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.6□□□□□ -0.07
ShbQ6PD21 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Gm8385-201ENSMUST00000058999 643 ntBASIC14.6□□□□□ -0.07
ShbQ6PD21 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ShbQ6PD21 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
ShbQ6PD21 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.6□□□□□ -0.07
ShbQ6PD21 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.6□□□□□ -0.07
ShbQ6PD21 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShbQ6PD21 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
ShbQ6PD21 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ShbQ6PD21 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ShbQ6PD21 Snord83b-201ENSMUST00000104546 94 ntBASIC14.59□□□□□ -0.07
ShbQ6PD21 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.59□□□□□ -0.07
ShbQ6PD21 Gm13813-201ENSMUST00000120998 787 ntBASIC14.59□□□□□ -0.07
ShbQ6PD21 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.59□□□□□ -0.07
ShbQ6PD21 Gm15547-201ENSMUST00000122152 333 ntBASIC14.59□□□□□ -0.07
ShbQ6PD21 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Gm27438-201ENSMUST00000183480 110 ntBASIC14.59□□□□□ -0.07
ShbQ6PD21 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.59□□□□□ -0.07
ShbQ6PD21 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.59□□□□□ -0.07
ShbQ6PD21 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
ShbQ6PD21 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
ShbQ6PD21 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms