Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK1P53667 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK1P53667 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK1P53667 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 MIR658-201ENST00000385210 100 ntBASIC16.46■□□□□ 0.23
LIMK1P53667 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.46■□□□□ 0.23
LIMK1P53667 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.46■□□□□ 0.23
LIMK1P53667 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK1P53667 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK1P53667 RN7SL752P-201ENST00000463779 287 ntBASIC16.46■□□□□ 0.23
LIMK1P53667 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.46■□□□□ 0.23
LIMK1P53667 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LIMK1P53667 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.46■□□□□ 0.23
LIMK1P53667 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.46■□□□□ 0.23
LIMK1P53667 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.46■□□□□ 0.23
LIMK1P53667 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LIMK1P53667 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
LIMK1P53667 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.46■□□□□ 0.23
LIMK1P53667 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK1P53667 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.46■□□□□ 0.23
LIMK1P53667 AC046185.3-201ENST00000623228 1824 ntBASIC16.46■□□□□ 0.23
LIMK1P53667 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK1P53667 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LIMK1P53667 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LIMK1P53667 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LIMK1P53667 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LIMK1P53667 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.46■□□□□ 0.22
LIMK1P53667 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
LIMK1P53667 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LIMK1P53667 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LIMK1P53667 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.45■□□□□ 0.22
LIMK1P53667 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.45■□□□□ 0.22
LIMK1P53667 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 AC087499.6-201ENST00000411576 835 ntBASIC16.45■□□□□ 0.22
LIMK1P53667 DFFBP1-201ENST00000433250 979 ntBASIC16.45■□□□□ 0.22
LIMK1P53667 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.45■□□□□ 0.22
LIMK1P53667 KRT17P8-201ENST00000540749 863 ntBASIC16.45■□□□□ 0.22
LIMK1P53667 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.45■□□□□ 0.22
LIMK1P53667 RAB43P1-201ENST00000561790 589 ntBASIC16.45■□□□□ 0.22
LIMK1P53667 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.45■□□□□ 0.22
LIMK1P53667 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.45■□□□□ 0.22
LIMK1P53667 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.45■□□□□ 0.22
LIMK1P53667 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.45■□□□□ 0.22
LIMK1P53667 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.45■□□□□ 0.22
LIMK1P53667 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LIMK1P53667 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.45■□□□□ 0.22
LIMK1P53667 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK1P53667 AC087499.5-201ENST00000452760 1342 ntBASIC16.45■□□□□ 0.22
LIMK1P53667 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.44■□□□□ 0.22
LIMK1P53667 AC018695.7-201ENST00000624587 2492 ntBASIC16.44■□□□□ 0.22
LIMK1P53667 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
LIMK1P53667 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
LIMK1P53667 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LIMK1P53667 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.44■□□□□ 0.22
LIMK1P53667 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.44■□□□□ 0.22
LIMK1P53667 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK1P53667 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LIMK1P53667 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.44■□□□□ 0.22
LIMK1P53667 RARRES2P9-201ENST00000565168 469 ntBASIC16.44■□□□□ 0.22
LIMK1P53667 AC009407.1-201ENST00000568958 598 ntBASIC16.44■□□□□ 0.22
LIMK1P53667 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.44■□□□□ 0.22
LIMK1P53667 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.44■□□□□ 0.22
LIMK1P53667 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms