Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.47□□□□□ -0.09
HCFC1P51610 AL391825.1-201ENST00000457671 1364 ntBASIC14.47□□□□□ -0.09
HCFC1P51610 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HCFC1P51610 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.47□□□□□ -0.09
HCFC1P51610 CROCCP2-202ENST00000412962 2773 ntBASIC14.46□□□□□ -0.09
HCFC1P51610 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HCFC1P51610 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.46□□□□□ -0.09
HCFC1P51610 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.46□□□□□ -0.09
HCFC1P51610 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HCFC1P51610 RNA5SP410-201ENST00000516285 106 ntBASIC14.46□□□□□ -0.09
HCFC1P51610 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.46□□□□□ -0.09
HCFC1P51610 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.46□□□□□ -0.09
HCFC1P51610 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.46□□□□□ -0.09
HCFC1P51610 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.46□□□□□ -0.09
HCFC1P51610 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.46□□□□□ -0.09
HCFC1P51610 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.46□□□□□ -0.09
HCFC1P51610 SLC7A15P-201ENST00000424028 1363 ntBASIC14.46□□□□□ -0.09
HCFC1P51610 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HCFC1P51610 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HCFC1P51610 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCFC1P51610 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HCFC1P51610 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.46□□□□□ -0.1
HCFC1P51610 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HCFC1P51610 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HCFC1P51610 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HCFC1P51610 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
HCFC1P51610 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HCFC1P51610 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.46□□□□□ -0.1
HCFC1P51610 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.46□□□□□ -0.1
HCFC1P51610 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.46□□□□□ -0.1
HCFC1P51610 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HCFC1P51610 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HCFC1P51610 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.46□□□□□ -0.1
HCFC1P51610 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.45□□□□□ -0.1
HCFC1P51610 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
HCFC1P51610 RN7SL837P-201ENST00000463010 287 ntBASIC14.45□□□□□ -0.1
HCFC1P51610 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HCFC1P51610 AC009053.2-201ENST00000563701 2365 ntBASIC14.45□□□□□ -0.1
HCFC1P51610 TP53TG3HP-202ENST00000569755 579 ntBASIC14.45□□□□□ -0.1
HCFC1P51610 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.45□□□□□ -0.1
HCFC1P51610 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HCFC1P51610 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 AL359881.2-201ENST00000602973 570 ntBASIC14.45□□□□□ -0.1
HCFC1P51610 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.45□□□□□ -0.1
HCFC1P51610 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.45□□□□□ -0.1
HCFC1P51610 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.45□□□□□ -0.1
HCFC1P51610 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.45□□□□□ -0.1
HCFC1P51610 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.45□□□□□ -0.1
HCFC1P51610 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCFC1P51610 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.45□□□□□ -0.1
HCFC1P51610 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms