Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.86■□□□□ 0.29
CHRNA4P43681 MIR4515-201ENST00000584082 81 ntBASIC16.86■□□□□ 0.29
CHRNA4P43681 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA4P43681 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA4P43681 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHRNA4P43681 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHRNA4P43681 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CHRNA4P43681 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHRNA4P43681 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA4P43681 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA4P43681 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CHRNA4P43681 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHRNA4P43681 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA4P43681 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHRNA4P43681 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.86■□□□□ 0.29
CHRNA4P43681 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA4P43681 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA4P43681 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA4P43681 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA4P43681 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA4P43681 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA4P43681 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA4P43681 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA4P43681 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 RHOQP3-201ENST00000437982 621 ntBASIC16.85■□□□□ 0.29
CHRNA4P43681 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA4P43681 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.85■□□□□ 0.29
CHRNA4P43681 AC096734.2-201ENST00000562054 433 ntBASIC16.85■□□□□ 0.29
CHRNA4P43681 AC106730.1-201ENST00000566722 1090 ntBASIC16.85■□□□□ 0.29
CHRNA4P43681 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 AP001350.2-201ENST00000625104 1094 ntBASIC16.85■□□□□ 0.29
CHRNA4P43681 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA4P43681 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA4P43681 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA4P43681 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA4P43681 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA4P43681 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA4P43681 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHRNA4P43681 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHRNA4P43681 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNA4P43681 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNA4P43681 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.84■□□□□ 0.29
CHRNA4P43681 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNA4P43681 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.84■□□□□ 0.29
CHRNA4P43681 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CHRNA4P43681 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHRNA4P43681 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 GGT3P-204ENST00000453783 1664 ntBASIC16.84■□□□□ 0.29
CHRNA4P43681 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CHRNA4P43681 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA4P43681 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA4P43681 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHRNA4P43681 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.83■□□□□ 0.29
CHRNA4P43681 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms