Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.72■□□□□ 0.27
XRCC1P18887 PAWRP1-201ENST00000451083 565 ntBASIC16.72■□□□□ 0.27
XRCC1P18887 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.72■□□□□ 0.27
XRCC1P18887 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.72■□□□□ 0.27
XRCC1P18887 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.72■□□□□ 0.27
XRCC1P18887 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.72■□□□□ 0.27
XRCC1P18887 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.72■□□□□ 0.27
XRCC1P18887 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.72■□□□□ 0.27
XRCC1P18887 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.72■□□□□ 0.27
XRCC1P18887 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.72■□□□□ 0.27
XRCC1P18887 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.72■□□□□ 0.27
XRCC1P18887 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
XRCC1P18887 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.72■□□□□ 0.27
XRCC1P18887 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
XRCC1P18887 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC1P18887 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.71■□□□□ 0.27
XRCC1P18887 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
XRCC1P18887 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC1P18887 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC1P18887 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC1P18887 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC1P18887 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC1P18887 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC1P18887 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
XRCC1P18887 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC1P18887 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
XRCC1P18887 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.71■□□□□ 0.27
XRCC1P18887 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC1P18887 AC092865.5-201ENST00000545435 363 ntBASIC16.71■□□□□ 0.27
XRCC1P18887 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.71■□□□□ 0.27
XRCC1P18887 OR7E47P-204ENST00000575924 449 ntBASIC16.71■□□□□ 0.27
XRCC1P18887 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.71■□□□□ 0.27
XRCC1P18887 AC007950.2-201ENST00000615045 2347 ntBASIC16.71■□□□□ 0.27
XRCC1P18887 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
XRCC1P18887 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC1P18887 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
XRCC1P18887 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.71■□□□□ 0.27
XRCC1P18887 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.71■□□□□ 0.27
XRCC1P18887 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
XRCC1P18887 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
XRCC1P18887 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
XRCC1P18887 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
XRCC1P18887 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
XRCC1P18887 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
XRCC1P18887 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 SLC25A1P3-201ENST00000395415 828 ntBASIC16.7■□□□□ 0.26
XRCC1P18887 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.7■□□□□ 0.26
XRCC1P18887 AC004832.2-201ENST00000426397 482 ntBASIC16.7■□□□□ 0.26
XRCC1P18887 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.7■□□□□ 0.26
XRCC1P18887 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.7■□□□□ 0.26
XRCC1P18887 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.7■□□□□ 0.26
XRCC1P18887 AC006538.3-201ENST00000612495 578 ntBASIC16.7■□□□□ 0.26
XRCC1P18887 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
XRCC1P18887 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.7■□□□□ 0.26
XRCC1P18887 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
XRCC1P18887 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.7■□□□□ 0.26
XRCC1P18887 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC1P18887 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
XRCC1P18887 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
XRCC1P18887 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
XRCC1P18887 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
XRCC1P18887 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.69■□□□□ 0.26
XRCC1P18887 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
XRCC1P18887 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.69■□□□□ 0.26
XRCC1P18887 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.69■□□□□ 0.26
XRCC1P18887 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.69■□□□□ 0.26
XRCC1P18887 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.69■□□□□ 0.26
XRCC1P18887 AC002347.1-201ENST00000569543 541 ntBASIC16.69■□□□□ 0.26
XRCC1P18887 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms