Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 AL391825.1-201ENST00000457671 1364 ntBASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSB-PGBD3P0DP91 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 AC011495.1-201ENST00000498085 584 ntBASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 AL512361.1-201ENST00000554200 418 ntBASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 AC044860.1-202ENST00000559481 777 ntBASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 AC004790.1-201ENST00000612686 536 ntBASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSB-PGBD3P0DP91 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 AC093004.1-201ENST00000508850 424 ntBASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 AC007431.3-201ENST00000623221 587 ntBASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSB-PGBD3P0DP91 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
CSB-PGBD3P0DP91 AL138688.1-201ENST00000624851 1594 ntBASIC21.95■■□□□ 1.11
CSB-PGBD3P0DP91 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 SPDYE18-201ENST00000510091 1050 ntBASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 ZNF890P-202ENST00000530367 1156 ntBASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 MIR6799-201ENST00000620297 69 ntBASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 TUBB8P12-201ENST00000308911 1335 ntBASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 TUBB7P-202ENST00000428444 1305 ntBASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 TUBB8P7-204ENST00000567960 1332 ntBASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 AC006277.1-201ENST00000624348 1610 ntBASIC21.95■■□□□ 1.1
CSB-PGBD3P0DP91 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms