Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLTAP09496 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.3■□□□□ 0.52
CLTAP09496 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLTAP09496 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLTAP09496 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLTAP09496 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.29■□□□□ 0.52
CLTAP09496 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 UBALD1-205ENST00000590891 2641 ntBASIC18.29■□□□□ 0.52
CLTAP09496 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 AC105020.1-201ENST00000435356 2205 ntBASIC18.29■□□□□ 0.52
CLTAP09496 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLTAP09496 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.29■□□□□ 0.52
CLTAP09496 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.29■□□□□ 0.52
CLTAP09496 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.29■□□□□ 0.52
CLTAP09496 AC140658.5-201ENST00000438532 169 ntBASIC18.29■□□□□ 0.52
CLTAP09496 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.29■□□□□ 0.52
CLTAP09496 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CLTAP09496 ALG1L5P-201ENST00000482043 771 ntBASIC18.29■□□□□ 0.52
CLTAP09496 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.29■□□□□ 0.52
CLTAP09496 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.29■□□□□ 0.52
CLTAP09496 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.29■□□□□ 0.52
CLTAP09496 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.29■□□□□ 0.52
CLTAP09496 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CLTAP09496 AL078644.1-201ENST00000609881 752 ntBASIC18.29■□□□□ 0.52
CLTAP09496 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.29■□□□□ 0.52
CLTAP09496 AC092919.2-201ENST00000623631 1645 ntBASIC18.29■□□□□ 0.52
CLTAP09496 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.29■□□□□ 0.52
CLTAP09496 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
CLTAP09496 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLTAP09496 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLTAP09496 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLTAP09496 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 AL391005.1-201ENST00000623953 2435 ntBASIC18.28■□□□□ 0.52
CLTAP09496 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.28■□□□□ 0.52
CLTAP09496 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.28■□□□□ 0.52
CLTAP09496 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 FAM58CP-201ENST00000435741 640 ntBASIC18.28■□□□□ 0.52
CLTAP09496 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.28■□□□□ 0.52
CLTAP09496 YBX1P5-201ENST00000509441 847 ntBASIC18.28■□□□□ 0.52
CLTAP09496 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CLTAP09496 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.28■□□□□ 0.52
CLTAP09496 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.28■□□□□ 0.52
CLTAP09496 AC091812.2-201ENST00000619081 385 ntBASIC18.28■□□□□ 0.52
CLTAP09496 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.28■□□□□ 0.52
CLTAP09496 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.28■□□□□ 0.52
CLTAP09496 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CLTAP09496 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.28■□□□□ 0.52
CLTAP09496 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLTAP09496 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CLTAP09496 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 AL162727.3-201ENST00000635661 2787 ntBASIC18.27■□□□□ 0.52
CLTAP09496 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CLTAP09496 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLTAP09496 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CLTAP09496 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.27■□□□□ 0.52
CLTAP09496 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.27■□□□□ 0.52
CLTAP09496 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.27■□□□□ 0.52
CLTAP09496 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.27■□□□□ 0.52
CLTAP09496 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.27■□□□□ 0.52
CLTAP09496 CYP2A7P1-201ENST00000595391 815 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms