Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TIMP1P01033 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 SNX33P1-201ENST00000592116 1762 ntBASIC17.84■□□□□ 0.45
TIMP1P01033 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.84■□□□□ 0.45
TIMP1P01033 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.83■□□□□ 0.45
TIMP1P01033 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.83■□□□□ 0.45
TIMP1P01033 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TIMP1P01033 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TIMP1P01033 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TIMP1P01033 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TIMP1P01033 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.83■□□□□ 0.44
TIMP1P01033 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.83■□□□□ 0.44
TIMP1P01033 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TIMP1P01033 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.83■□□□□ 0.44
TIMP1P01033 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TIMP1P01033 USP32P1-208ENST00000506594 1164 ntBASIC17.83■□□□□ 0.44
TIMP1P01033 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.83■□□□□ 0.44
TIMP1P01033 AC124947.2-201ENST00000547118 1133 ntBASIC17.83■□□□□ 0.44
TIMP1P01033 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.83■□□□□ 0.44
TIMP1P01033 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.83■□□□□ 0.44
TIMP1P01033 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.83■□□□□ 0.44
TIMP1P01033 AC074044.1-201ENST00000609673 707 ntBASIC17.83■□□□□ 0.44
TIMP1P01033 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TIMP1P01033 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.83■□□□□ 0.44
TIMP1P01033 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.83■□□□□ 0.44
TIMP1P01033 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.83■□□□□ 0.44
TIMP1P01033 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.83■□□□□ 0.44
TIMP1P01033 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TIMP1P01033 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TIMP1P01033 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TIMP1P01033 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.83■□□□□ 0.44
TIMP1P01033 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TIMP1P01033 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMP1P01033 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.82■□□□□ 0.44
TIMP1P01033 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMP1P01033 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.82■□□□□ 0.44
TIMP1P01033 AC018665.1-201ENST00000622927 1362 ntBASIC17.82■□□□□ 0.44
TIMP1P01033 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMP1P01033 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.82■□□□□ 0.44
TIMP1P01033 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.82■□□□□ 0.44
TIMP1P01033 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 AC092933.1-201ENST00000393644 945 ntBASIC17.82■□□□□ 0.44
TIMP1P01033 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TIMP1P01033 AL139010.1-201ENST00000454878 894 ntBASIC17.82■□□□□ 0.44
TIMP1P01033 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.82■□□□□ 0.44
TIMP1P01033 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.82■□□□□ 0.44
TIMP1P01033 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TIMP1P01033 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.82■□□□□ 0.44
TIMP1P01033 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.82■□□□□ 0.44
TIMP1P01033 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMP1P01033 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 AC233724.13-201ENST00000598383 410 ntBASIC17.82■□□□□ 0.44
TIMP1P01033 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMP1P01033 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.82■□□□□ 0.44
TIMP1P01033 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.82■□□□□ 0.44
TIMP1P01033 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMP1P01033 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TIMP1P01033 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.82■□□□□ 0.44
TIMP1P01033 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.82■□□□□ 0.44
TIMP1P01033 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP1P01033 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TIMP1P01033 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.81■□□□□ 0.44
TIMP1P01033 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.81■□□□□ 0.44
TIMP1P01033 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP1P01033 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms