Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ALDH1A1P00352 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ALDH1A1P00352 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.84■□□□□ 0.61
ALDH1A1P00352 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ALDH1A1P00352 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALDH1A1P00352 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ALDH1A1P00352 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ALDH1A1P00352 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALDH1A1P00352 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALDH1A1P00352 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ALDH1A1P00352 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.83■□□□□ 0.61
ALDH1A1P00352 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALDH1A1P00352 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALDH1A1P00352 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.83■□□□□ 0.61
ALDH1A1P00352 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ALDH1A1P00352 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.83■□□□□ 0.61
ALDH1A1P00352 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.61
ALDH1A1P00352 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALDH1A1P00352 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALDH1A1P00352 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALDH1A1P00352 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 AL162726.2-201ENST00000438986 1017 ntBASIC18.83■□□□□ 0.6
ALDH1A1P00352 CSF2RBP1-201ENST00000447905 391 ntBASIC18.83■□□□□ 0.6
ALDH1A1P00352 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALDH1A1P00352 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 AL139099.5-201ENST00000635274 300 ntBASIC18.83■□□□□ 0.6
ALDH1A1P00352 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALDH1A1P00352 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALDH1A1P00352 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALDH1A1P00352 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALDH1A1P00352 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALDH1A1P00352 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALDH1A1P00352 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.83■□□□□ 0.6
ALDH1A1P00352 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 AC090164.3-201ENST00000610780 2143 ntBASIC18.82■□□□□ 0.6
ALDH1A1P00352 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 AL139010.1-201ENST00000454878 894 ntBASIC18.82■□□□□ 0.6
ALDH1A1P00352 AC099548.2-209ENST00000480264 625 ntBASIC18.82■□□□□ 0.6
ALDH1A1P00352 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
ALDH1A1P00352 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALDH1A1P00352 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 TUBB8P12-201ENST00000308911 1335 ntBASIC18.81■□□□□ 0.6
ALDH1A1P00352 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 TUBB7P-202ENST00000428444 1305 ntBASIC18.81■□□□□ 0.6
ALDH1A1P00352 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 TUBB8P7-204ENST00000567960 1332 ntBASIC18.81■□□□□ 0.6
ALDH1A1P00352 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 AL355312.1-201ENST00000407115 2176 ntBASIC18.81■□□□□ 0.6
ALDH1A1P00352 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 SLC25A1P3-201ENST00000395415 828 ntBASIC18.81■□□□□ 0.6
ALDH1A1P00352 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALDH1A1P00352 ACTG1P3-201ENST00000431775 1114 ntBASIC18.81■□□□□ 0.6
ALDH1A1P00352 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.81■□□□□ 0.6
ALDH1A1P00352 AC013467.2-201ENST00000605472 835 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms