Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDZRN3Q9UPQ7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.56■■□□□ 1.04
PDZRN3Q9UPQ7 AC069262.1-201ENST00000539058 672 ntBASIC21.56■■□□□ 1.04
PDZRN3Q9UPQ7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
PDZRN3Q9UPQ7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDZRN3Q9UPQ7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PDZRN3Q9UPQ7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDZRN3Q9UPQ7 AC092171.3-201ENST00000610122 2651 ntBASIC21.56■■□□□ 1.04
PDZRN3Q9UPQ7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PDZRN3Q9UPQ7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDZRN3Q9UPQ7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDZRN3Q9UPQ7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 AL513480.1-201ENST00000451731 511 ntBASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 AL512356.2-201ENST00000546955 174 ntBASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 EGFEM1P-202ENST00000431685 1563 ntBASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDZRN3Q9UPQ7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 CNN2P2-201ENST00000443536 909 ntBASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 CNN2P3-201ENST00000450201 906 ntBASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 ACTL9-202ENST00000612068 1252 ntBASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 AL136317.3-201ENST00000618497 906 ntBASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 AC129492.6-201ENST00000611383 1305 ntBASIC21.54■■□□□ 1.04
PDZRN3Q9UPQ7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 AC124947.2-201ENST00000547118 1133 ntBASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 AC093520.2-201ENST00000561830 333 ntBASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 AC063926.2-201ENST00000623766 1308 ntBASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PDZRN3Q9UPQ7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDZRN3Q9UPQ7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms