Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 AC009093.7-201ENST00000623853 1223 ntBASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
HDAC6Q9UBN7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
HDAC6Q9UBN7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HDAC6Q9UBN7 CICP6-201ENST00000457191 2729 ntBASIC18.89■□□□□ 0.62
HDAC6Q9UBN7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 FLJ38576-201ENST00000623820 2459 ntBASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 TFAMP1-201ENST00000412727 736 ntBASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 BCRP1-201ENST00000444246 691 ntBASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 AC005498.2-205ENST00000593218 784 ntBASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC6Q9UBN7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 AC046158.3-201ENST00000624947 2558 ntBASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 HMGA1P7-201ENST00000406908 502 ntBASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 AL592309.1-201ENST00000443127 649 ntBASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 AC079140.1-201ENST00000508039 487 ntBASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 AC243562.1-201ENST00000560672 389 ntBASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 AL096865.1-201ENST00000606796 927 ntBASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms