Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2OQ9C0C9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2OQ9C0C9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
UBE2OQ9C0C9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
UBE2OQ9C0C9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
UBE2OQ9C0C9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
UBE2OQ9C0C9 AC046185.3-201ENST00000623228 1824 ntBASIC18.39■□□□□ 0.54
UBE2OQ9C0C9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBE2OQ9C0C9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.39■□□□□ 0.54
UBE2OQ9C0C9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBE2OQ9C0C9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBE2OQ9C0C9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 AC234783.1-201ENST00000441761 496 ntBASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 TTTY23B-201ENST00000442790 549 ntBASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 AC135586.1-201ENST00000539323 574 ntBASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 AP005482.1-201ENST00000563722 1273 ntBASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 AC133552.6-201ENST00000613406 534 ntBASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 AC004840.1-201ENST00000636359 365 ntBASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 COX11-210ENST00000639671 696 ntBASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2OQ9C0C9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 AP3S2-216ENST00000617003 1561 ntBASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 KRT223P-202ENST00000449164 1292 ntBASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 WASH4P-201ENST00000564273 1246 ntBASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 GPR182-203ENST00000622922 591 ntBASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE2OQ9C0C9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 AC124067.4-201ENST00000519691 2379 ntBASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 HCG4-201ENST00000418983 998 ntBASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2OQ9C0C9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms