Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 AC109322.1-201ENST00000524499 1264 ntBASIC16.18■□□□□ 0.18
RNF31Q96EP0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF31Q96EP0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF31Q96EP0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 AC093512.1-201ENST00000617969 520 ntBASIC16.17■□□□□ 0.18
RNF31Q96EP0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF31Q96EP0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF31Q96EP0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF31Q96EP0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF31Q96EP0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF31Q96EP0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF31Q96EP0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF31Q96EP0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF31Q96EP0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF31Q96EP0 AC133963.1-201ENST00000504166 1679 ntBASIC16.16■□□□□ 0.18
RNF31Q96EP0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF31Q96EP0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF31Q96EP0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 SLC25A6P5-201ENST00000435663 894 ntBASIC16.16■□□□□ 0.18
RNF31Q96EP0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 KRT8P48-201ENST00000515599 1220 ntBASIC16.16■□□□□ 0.18
RNF31Q96EP0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.16■□□□□ 0.18
RNF31Q96EP0 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 AC105339.1-204ENST00000636249 355 ntBASIC16.16■□□□□ 0.18
RNF31Q96EP0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF31Q96EP0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms