Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.11■□□□□ 0.01
RTL6Q6ICC9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 AC005412.3-201ENST00000580309 715 ntBASIC15.1■□□□□ 0.01
RTL6Q6ICC9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 AC124067.4-201ENST00000519691 2379 ntBASIC15.1■□□□□ 0.01
RTL6Q6ICC9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTL6Q6ICC9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 NKILA-202ENST00000614771 2598 ntBASIC15.09■□□□□ 0.01
RTL6Q6ICC9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 MIR770-201ENST00000390219 98 ntBASIC15.09■□□□□ 0.01
RTL6Q6ICC9 SLC25A1P3-201ENST00000395415 828 ntBASIC15.09■□□□□ 0.01
RTL6Q6ICC9 AL627223.1-201ENST00000416693 442 ntBASIC15.09■□□□□ 0.01
RTL6Q6ICC9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 FAM86C2P-203ENST00000528684 1004 ntBASIC15.09■□□□□ 0.01
RTL6Q6ICC9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 LINC00628-201ENST00000628516 1289 ntBASIC15.09■□□□□ 0.01
RTL6Q6ICC9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTL6Q6ICC9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms