Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
CBX1P83916 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 LINC02447-202ENST00000501888 2146 ntBASIC17.53■□□□□ 0.4
CBX1P83916 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CBX1P83916 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CBX1P83916 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX1P83916 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.52■□□□□ 0.4
CBX1P83916 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX1P83916 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.52■□□□□ 0.4
CBX1P83916 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CBX1P83916 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.52■□□□□ 0.4
CBX1P83916 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.52■□□□□ 0.4
CBX1P83916 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX1P83916 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX1P83916 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CBX1P83916 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.52■□□□□ 0.4
CBX1P83916 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
CBX1P83916 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX1P83916 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.52■□□□□ 0.4
CBX1P83916 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CBX1P83916 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CBX1P83916 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CBX1P83916 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX1P83916 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CBX1P83916 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.52■□□□□ 0.39
CBX1P83916 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 GGT4P-201ENST00000623672 1708 ntBASIC17.52■□□□□ 0.39
CBX1P83916 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CBX1P83916 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.51■□□□□ 0.39
CBX1P83916 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CBX1P83916 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.51■□□□□ 0.39
CBX1P83916 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.51■□□□□ 0.39
CBX1P83916 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CBX1P83916 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CBX1P83916 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CBX1P83916 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.51■□□□□ 0.39
CBX1P83916 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.51■□□□□ 0.39
CBX1P83916 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.51■□□□□ 0.39
CBX1P83916 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC17.51■□□□□ 0.39
CBX1P83916 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.51■□□□□ 0.39
CBX1P83916 AL121829.2-201ENST00000620908 328 ntBASIC17.51■□□□□ 0.39
CBX1P83916 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CBX1P83916 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.51■□□□□ 0.39
CBX1P83916 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 AC016027.1-202ENST00000607927 1699 ntBASIC17.51■□□□□ 0.39
CBX1P83916 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 REXO1L2P-201ENST00000425429 2069 ntBASIC17.51■□□□□ 0.39
CBX1P83916 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX1P83916 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CBX1P83916 Z82170.1-201ENST00000625081 3192 ntBASIC17.5■□□□□ 0.39
CBX1P83916 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CBX1P83916 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.5■□□□□ 0.39
CBX1P83916 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms