Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS1BP61024 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
CKS1BP61024 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
CKS1BP61024 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS1BP61024 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CKS1BP61024 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
CKS1BP61024 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS1BP61024 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CKS1BP61024 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.82□□□□□ -0.52
CKS1BP61024 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS1BP61024 PCDHA3-202ENST00000532566 4594 ntBASIC11.82□□□□□ -0.52
CKS1BP61024 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS1BP61024 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS1BP61024 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS1BP61024 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CKS1BP61024 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS1BP61024 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS1BP61024 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC11.81□□□□□ -0.52
CKS1BP61024 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CKS1BP61024 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 MDFI-202ENST00000373050 809 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
CKS1BP61024 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC11.81□□□□□ -0.52
CKS1BP61024 SEC1P-202ENST00000473944 940 ntBASIC11.81□□□□□ -0.52
CKS1BP61024 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 DHDH-203ENST00000522614 776 ntTSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC11.81□□□□□ -0.52
CKS1BP61024 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC11.81□□□□□ -0.52
CKS1BP61024 FITM1-202ENST00000559294 800 ntBASIC11.81□□□□□ -0.52
CKS1BP61024 MIR3917-201ENST00000580971 93 ntBASIC11.81□□□□□ -0.52
CKS1BP61024 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 AP000525.1-201ENST00000608286 694 ntBASIC11.81□□□□□ -0.52
CKS1BP61024 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CKS1BP61024 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CKS1BP61024 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 AGGF1P2-201ENST00000426656 2106 ntBASIC11.81□□□□□ -0.52
CKS1BP61024 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 AC007191.1-201ENST00000623179 2995 ntBASIC11.81□□□□□ -0.52
CKS1BP61024 MME-217ENST00000616757 1315 ntTSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CKS1BP61024 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CKS1BP61024 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CKS1BP61024 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS1BP61024 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 AC073869.1-201ENST00000415574 2762 ntBASIC11.8□□□□□ -0.52
CKS1BP61024 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 ST20-AS1-201ENST00000560255 4223 ntBASIC11.8□□□□□ -0.52
CKS1BP61024 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS1BP61024 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS1BP61024 LINC00167-201ENST00000530583 1419 ntBASIC11.8□□□□□ -0.52
CKS1BP61024 AC016396.2-201ENST00000562575 1417 ntBASIC11.8□□□□□ -0.52
CKS1BP61024 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CKS1BP61024 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CKS1BP61024 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms