Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHBDL3P58872 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
RHBDL3P58872 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RHBDL3P58872 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.61■□□□□ 0.73
RHBDL3P58872 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.61■□□□□ 0.73
RHBDL3P58872 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.61■□□□□ 0.73
RHBDL3P58872 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RHBDL3P58872 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.61■□□□□ 0.73
RHBDL3P58872 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.61■□□□□ 0.73
RHBDL3P58872 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.61■□□□□ 0.73
RHBDL3P58872 AC009477.1-201ENST00000452936 217 ntBASIC19.61■□□□□ 0.73
RHBDL3P58872 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.61■□□□□ 0.73
RHBDL3P58872 RNA5SP410-201ENST00000516285 106 ntBASIC19.61■□□□□ 0.73
RHBDL3P58872 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.61■□□□□ 0.73
RHBDL3P58872 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 AC190387.1-201ENST00000551683 408 ntBASIC19.61■□□□□ 0.73
RHBDL3P58872 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.61■□□□□ 0.73
RHBDL3P58872 AC020765.3-201ENST00000613051 740 ntBASIC19.61■□□□□ 0.73
RHBDL3P58872 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.61■□□□□ 0.73
RHBDL3P58872 AF228730.6-201ENST00000641497 218 ntBASIC19.61■□□□□ 0.73
RHBDL3P58872 AC084121.3-201ENST00000641716 218 ntBASIC19.61■□□□□ 0.73
RHBDL3P58872 AC105233.6-201ENST00000642093 218 ntBASIC19.61■□□□□ 0.73
RHBDL3P58872 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.61■□□□□ 0.73
RHBDL3P58872 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RHBDL3P58872 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.61■□□□□ 0.73
RHBDL3P58872 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.61■□□□□ 0.73
RHBDL3P58872 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 AL589702.1-201ENST00000641229 1509 ntBASIC19.61■□□□□ 0.73
RHBDL3P58872 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHBDL3P58872 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.6■□□□□ 0.73
RHBDL3P58872 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.6■□□□□ 0.73
RHBDL3P58872 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.6■□□□□ 0.73
RHBDL3P58872 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 AC005915.1-201ENST00000624912 2018 ntBASIC19.6■□□□□ 0.73
RHBDL3P58872 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.6■□□□□ 0.73
RHBDL3P58872 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.6■□□□□ 0.73
RHBDL3P58872 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RHBDL3P58872 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.6■□□□□ 0.73
RHBDL3P58872 AL844908.2-201ENST00000609461 460 ntBASIC19.6■□□□□ 0.73
RHBDL3P58872 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.6■□□□□ 0.73
RHBDL3P58872 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 AC006538.1-201ENST00000567905 1585 ntBASIC19.6■□□□□ 0.73
RHBDL3P58872 AC022144.1-201ENST00000602255 1580 ntBASIC19.6■□□□□ 0.73
RHBDL3P58872 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RHBDL3P58872 AC105020.1-201ENST00000435356 2205 ntBASIC19.6■□□□□ 0.73
RHBDL3P58872 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RHBDL3P58872 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHBDL3P58872 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RHBDL3P58872 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
RHBDL3P58872 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RHBDL3P58872 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.59■□□□□ 0.73
RHBDL3P58872 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.59■□□□□ 0.73
RHBDL3P58872 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.59■□□□□ 0.73
RHBDL3P58872 AC005332.8-201ENST00000622750 2735 ntBASIC19.59■□□□□ 0.73
RHBDL3P58872 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RHBDL3P58872 FZD10-202ENST00000539839 3282 ntBASIC19.59■□□□□ 0.73
RHBDL3P58872 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.59■□□□□ 0.73
RHBDL3P58872 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.59■□□□□ 0.73
RHBDL3P58872 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.59■□□□□ 0.73
RHBDL3P58872 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.59■□□□□ 0.73
RHBDL3P58872 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 AC009407.1-201ENST00000568958 598 ntBASIC19.59■□□□□ 0.73
RHBDL3P58872 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms