Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.36■□□□□ 0.69
ERCC3P19447 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ERCC3P19447 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC3P19447 SLC22A20-204ENST00000530038 1673 ntBASIC19.36■□□□□ 0.69
ERCC3P19447 AC008677.1-201ENST00000519230 1561 ntBASIC19.36■□□□□ 0.69
ERCC3P19447 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.36■□□□□ 0.69
ERCC3P19447 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.36■□□□□ 0.69
ERCC3P19447 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ERCC3P19447 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ERCC3P19447 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ERCC3P19447 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.35■□□□□ 0.69
ERCC3P19447 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.35■□□□□ 0.69
ERCC3P19447 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ERCC3P19447 HCG4-201ENST00000418983 998 ntBASIC19.35■□□□□ 0.69
ERCC3P19447 AC107890.1-201ENST00000422478 521 ntBASIC19.35■□□□□ 0.69
ERCC3P19447 AC125807.1-201ENST00000483097 614 ntBASIC19.35■□□□□ 0.69
ERCC3P19447 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ERCC3P19447 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ERCC3P19447 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ERCC3P19447 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC3P19447 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.35■□□□□ 0.69
ERCC3P19447 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.35■□□□□ 0.69
ERCC3P19447 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 AC022211.2-201ENST00000585075 2527 ntBASIC19.35■□□□□ 0.69
ERCC3P19447 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.35■□□□□ 0.69
ERCC3P19447 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.35■□□□□ 0.69
ERCC3P19447 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC3P19447 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ERCC3P19447 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ERCC3P19447 EGFEM1P-202ENST00000431685 1563 ntBASIC19.35■□□□□ 0.69
ERCC3P19447 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC3P19447 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.35■□□□□ 0.69
ERCC3P19447 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC3P19447 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 WASH6P-202ENST00000359512 1437 ntBASIC19.34■□□□□ 0.69
ERCC3P19447 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
ERCC3P19447 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC3P19447 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.34■□□□□ 0.69
ERCC3P19447 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ERCC3P19447 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ERCC3P19447 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC3P19447 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ERCC3P19447 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.34■□□□□ 0.69
ERCC3P19447 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ERCC3P19447 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.34■□□□□ 0.69
ERCC3P19447 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.34■□□□□ 0.69
ERCC3P19447 SLC25A39P2-201ENST00000537614 270 ntBASIC19.34■□□□□ 0.69
ERCC3P19447 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC3P19447 AC239800.4-201ENST00000603712 296 ntBASIC19.34■□□□□ 0.69
ERCC3P19447 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.34■□□□□ 0.69
ERCC3P19447 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ERCC3P19447 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC3P19447 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
ERCC3P19447 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC3P19447 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC3P19447 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC3P19447 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.33■□□□□ 0.69
ERCC3P19447 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC3P19447 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC3P19447 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC3P19447 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
ERCC3P19447 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ERCC3P19447 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC3P19447 RNU1-129P-201ENST00000384064 167 ntBASIC19.33■□□□□ 0.68
ERCC3P19447 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms