Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RHOP08100 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.23■□□□□ 0.35
RHOP08100 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 AC087499.5-201ENST00000452760 1342 ntBASIC17.22■□□□□ 0.35
RHOP08100 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.22■□□□□ 0.35
RHOP08100 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RHOP08100 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RHOP08100 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.22■□□□□ 0.35
RHOP08100 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RHOP08100 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RHOP08100 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RHOP08100 PCDHB17P-201ENST00000539533 2393 ntBASIC17.22■□□□□ 0.35
RHOP08100 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RHOP08100 NOC2LP2-201ENST00000407594 1944 ntBASIC17.22■□□□□ 0.35
RHOP08100 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RHOP08100 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RHOP08100 GK-202ENST00000378941 458 ntTSL 3 BASIC17.22■□□□□ 0.35
RHOP08100 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RHOP08100 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.22■□□□□ 0.35
RHOP08100 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.22■□□□□ 0.35
RHOP08100 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.22■□□□□ 0.35
RHOP08100 AC105021.1-202ENST00000570572 669 ntBASIC17.22■□□□□ 0.35
RHOP08100 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RHOP08100 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RHOP08100 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.22■□□□□ 0.35
RHOP08100 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.22■□□□□ 0.35
RHOP08100 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RHOP08100 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RHOP08100 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RHOP08100 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.22■□□□□ 0.35
RHOP08100 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
RHOP08100 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RHOP08100 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RHOP08100 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.21■□□□□ 0.35
RHOP08100 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.21■□□□□ 0.35
RHOP08100 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.21■□□□□ 0.35
RHOP08100 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.21■□□□□ 0.35
RHOP08100 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.21■□□□□ 0.35
RHOP08100 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RHOP08100 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.21■□□□□ 0.35
RHOP08100 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.21■□□□□ 0.35
RHOP08100 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.21■□□□□ 0.35
RHOP08100 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RHOP08100 BANF1P1-201ENST00000553684 263 ntBASIC17.21■□□□□ 0.35
RHOP08100 AL596325.1-201ENST00000563991 1082 ntBASIC17.21■□□□□ 0.35
RHOP08100 AC009407.1-201ENST00000568958 598 ntBASIC17.21■□□□□ 0.35
RHOP08100 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.21■□□□□ 0.35
RHOP08100 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.21■□□□□ 0.35
RHOP08100 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.21■□□□□ 0.35
RHOP08100 AL844908.2-201ENST00000609461 460 ntBASIC17.21■□□□□ 0.35
RHOP08100 AC008738.7-201ENST00000609744 511 ntBASIC17.21■□□□□ 0.35
RHOP08100 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RHOP08100 AC090340.1-201ENST00000620778 4980 ntBASIC17.21■□□□□ 0.35
RHOP08100 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RHOP08100 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHOP08100 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.21■□□□□ 0.35
RHOP08100 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RHOP08100 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.21■□□□□ 0.35
RHOP08100 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RHOP08100 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RHOP08100 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
RHOP08100 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RHOP08100 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RHOP08100 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.21■□□□□ 0.34
RHOP08100 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.2■□□□□ 0.34
RHOP08100 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHOP08100 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.2■□□□□ 0.34
RHOP08100 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHOP08100 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHOP08100 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHOP08100 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHOP08100 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHOP08100 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHOP08100 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHOP08100 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHOP08100 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.2■□□□□ 0.34
RHOP08100 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.2■□□□□ 0.34
RHOP08100 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RHOP08100 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RHOP08100 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.2■□□□□ 0.34
RHOP08100 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.2■□□□□ 0.34
RHOP08100 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.2■□□□□ 0.34
RHOP08100 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.2■□□□□ 0.34
RHOP08100 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RHOP08100 AC068880.1-201ENST00000507289 2297 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms