Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GGPS1O95749 AC006277.1-201ENST00000624348 1610 ntBASIC18.74■□□□□ 0.59
GGPS1O95749 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
GGPS1O95749 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
GGPS1O95749 AP001094.4-201ENST00000579008 2176 ntBASIC18.74■□□□□ 0.59
GGPS1O95749 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.73■□□□□ 0.59
GGPS1O95749 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
GGPS1O95749 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 AL671710.1-201ENST00000610245 2349 ntBASIC18.73■□□□□ 0.59
GGPS1O95749 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
GGPS1O95749 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.73■□□□□ 0.59
GGPS1O95749 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
GGPS1O95749 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
GGPS1O95749 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.73■□□□□ 0.59
GGPS1O95749 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 AC125807.1-201ENST00000483097 614 ntBASIC18.73■□□□□ 0.59
GGPS1O95749 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.73■□□□□ 0.59
GGPS1O95749 KRT18P34-201ENST00000488218 1270 ntBASIC18.73■□□□□ 0.59
GGPS1O95749 AC093214.1-201ENST00000511688 1107 ntBASIC18.73■□□□□ 0.59
GGPS1O95749 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.73■□□□□ 0.59
GGPS1O95749 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.73■□□□□ 0.59
GGPS1O95749 MIR6080-201ENST00000617359 66 ntBASIC18.73■□□□□ 0.59
GGPS1O95749 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
GGPS1O95749 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GGPS1O95749 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.72■□□□□ 0.59
GGPS1O95749 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.72■□□□□ 0.59
GGPS1O95749 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.72■□□□□ 0.59
GGPS1O95749 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 MIR943-201ENST00000401286 94 ntBASIC18.72■□□□□ 0.59
GGPS1O95749 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.72■□□□□ 0.59
GGPS1O95749 SPDYE7P-202ENST00000420373 878 ntBASIC18.72■□□□□ 0.59
GGPS1O95749 AC107890.1-201ENST00000422478 521 ntBASIC18.72■□□□□ 0.59
GGPS1O95749 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.72■□□□□ 0.59
GGPS1O95749 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.72■□□□□ 0.59
GGPS1O95749 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.72■□□□□ 0.59
GGPS1O95749 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.72■□□□□ 0.59
GGPS1O95749 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.72■□□□□ 0.59
GGPS1O95749 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 AC013467.2-201ENST00000605472 835 ntBASIC18.72■□□□□ 0.59
GGPS1O95749 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
GGPS1O95749 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.72■□□□□ 0.59
GGPS1O95749 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.72■□□□□ 0.59
GGPS1O95749 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
GGPS1O95749 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GGPS1O95749 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GGPS1O95749 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.71■□□□□ 0.59
GGPS1O95749 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.71■□□□□ 0.59
GGPS1O95749 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GGPS1O95749 AD000864.1-201ENST00000624076 2295 ntBASIC18.71■□□□□ 0.59
GGPS1O95749 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GGPS1O95749 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GGPS1O95749 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GGPS1O95749 PCDHA12-202ENST00000613593 2588 ntBASIC18.71■□□□□ 0.59
GGPS1O95749 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GGPS1O95749 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
GGPS1O95749 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GGPS1O95749 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GGPS1O95749 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
GGPS1O95749 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GGPS1O95749 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.71■□□□□ 0.59
GGPS1O95749 AC055876.3-201ENST00000431496 288 ntBASIC18.71■□□□□ 0.59
GGPS1O95749 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.71■□□□□ 0.59
GGPS1O95749 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.71■□□□□ 0.59
GGPS1O95749 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.71■□□□□ 0.59
GGPS1O95749 AC138649.4-201ENST00000612222 287 ntBASIC18.71■□□□□ 0.59
GGPS1O95749 PCDHB17P-201ENST00000539533 2393 ntBASIC18.71■□□□□ 0.59
GGPS1O95749 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GGPS1O95749 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms