Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC22.82■■□□□ 1.24
CHD2O14647 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.82■■□□□ 1.24
CHD2O14647 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.82■■□□□ 1.24
CHD2O14647 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC22.82■■□□□ 1.24
CHD2O14647 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC22.82■■□□□ 1.24
CHD2O14647 RN7SL399P-201ENST00000471648 279 ntBASIC22.82■■□□□ 1.24
CHD2O14647 AC036164.1-201ENST00000570544 333 ntBASIC22.82■■□□□ 1.24
CHD2O14647 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC22.82■■□□□ 1.24
CHD2O14647 AC103810.3-201ENST00000583567 96 ntBASIC22.82■■□□□ 1.24
CHD2O14647 AC009542.2-202ENST00000619004 1067 ntBASIC22.82■■□□□ 1.24
CHD2O14647 AL139011.1-202ENST00000642063 584 ntBASIC22.82■■□□□ 1.24
CHD2O14647 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.82■■□□□ 1.24
CHD2O14647 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC22.82■■□□□ 1.24
CHD2O14647 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 AL136982.4-201ENST00000437689 1740 ntBASIC22.81■■□□□ 1.24
CHD2O14647 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC22.81■■□□□ 1.24
CHD2O14647 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC22.81■■□□□ 1.24
CHD2O14647 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC22.81■■□□□ 1.24
CHD2O14647 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
CHD2O14647 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC22.81■■□□□ 1.24
CHD2O14647 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC22.81■■□□□ 1.24
CHD2O14647 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 BOC-212ENST00000485230 2173 ntTSL 2 BASIC22.81■■□□□ 1.24
CHD2O14647 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.81■■□□□ 1.24
CHD2O14647 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD2O14647 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 DEK-201ENST00000244776 1441 ntTSL 2 BASIC22.8■■□□□ 1.24
CHD2O14647 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC22.8■■□□□ 1.24
CHD2O14647 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC22.8■■□□□ 1.24
CHD2O14647 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC22.8■■□□□ 1.24
CHD2O14647 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC22.8■■□□□ 1.24
CHD2O14647 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 RHOQP1-201ENST00000555758 579 ntBASIC22.8■■□□□ 1.24
CHD2O14647 DUX4L45-201ENST00000566406 1057 ntBASIC22.8■■□□□ 1.24
CHD2O14647 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC22.8■■□□□ 1.24
CHD2O14647 CU634019.7-201ENST00000624153 1185 ntBASIC22.8■■□□□ 1.24
CHD2O14647 FP236241.2-201ENST00000624906 1185 ntBASIC22.8■■□□□ 1.24
CHD2O14647 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC22.8■■□□□ 1.24
CHD2O14647 LINC02012-201ENST00000608206 1725 ntBASIC22.8■■□□□ 1.24
CHD2O14647 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 KRT8P22-201ENST00000562317 1415 ntBASIC22.8■■□□□ 1.24
CHD2O14647 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
CHD2O14647 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC22.8■■□□□ 1.24
CHD2O14647 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC22.8■■□□□ 1.24
CHD2O14647 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC22.8■■□□□ 1.24
CHD2O14647 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD2O14647 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CHD2O14647 RHBDF1P1-201ENST00000427504 1941 ntBASIC22.79■■□□□ 1.24
CHD2O14647 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CHD2O14647 GGT4P-201ENST00000623672 1708 ntBASIC22.79■■□□□ 1.24
CHD2O14647 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CHD2O14647 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.79■■□□□ 1.24
CHD2O14647 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHD2O14647 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHD2O14647 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC22.79■■□□□ 1.24
CHD2O14647 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHD2O14647 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHD2O14647 GZMB-202ENST00000382540 816 ntTSL 5 BASIC22.79■■□□□ 1.24
CHD2O14647 RPL28-203ENST00000428193 573 ntTSL 2 BASIC22.79■■□□□ 1.24
CHD2O14647 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CHD2O14647 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC22.79■■□□□ 1.24
CHD2O14647 RPL28-207ENST00000558815 616 ntTSL 2 BASIC22.79■■□□□ 1.24
CHD2O14647 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC22.79■■□□□ 1.24
CHD2O14647 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CHD2O14647 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC22.79■■□□□ 1.24
CHD2O14647 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CHD2O14647 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHD2O14647 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
CHD2O14647 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.78■■□□□ 1.24
CHD2O14647 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHD2O14647 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHD2O14647 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms