Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 RNPS1P1-201ENST00000507437 918 ntBASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 AP002490.2-201ENST00000524791 560 ntBASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 AL022326.1-202ENST00000641533 845 ntBASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGB3Q9Y5G1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 LINC02199-201ENST00000506655 2702 ntBASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 NCF1C-201ENST00000438382 1427 ntBASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 PCDHB17P-201ENST00000539533 2393 ntBASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 LINC00982-205ENST00000420957 435 ntBASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHGB3Q9Y5G1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB3Q9Y5G1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB3Q9Y5G1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB3Q9Y5G1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 TUBB8P12-201ENST00000308911 1335 ntBASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 TUBB7P-202ENST00000428444 1305 ntBASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 TUBB8P7-204ENST00000567960 1332 ntBASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 PCDHA1-201ENST00000378133 2726 ntBASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB3Q9Y5G1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms