Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AL096865.1-201ENST00000606796 927 ntBASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AC092171.3-201ENST00000610122 2651 ntBASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AC092580.3-201ENST00000430932 139 ntBASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 FAM86C2P-203ENST00000528684 1004 ntBASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AC109635.5-201ENST00000533593 962 ntBASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AJ011932.1-201ENST00000621707 465 ntBASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.84□□□□□ -0.03
KIAA1549Q9HCM3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
KIAA1549Q9HCM3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 NKILA-202ENST00000614771 2598 ntBASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 AIRN-201ENST00000601203 4374 ntBASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.83□□□□□ -0.04
KIAA1549Q9HCM3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 RBPMS2P1-201ENST00000437762 623 ntBASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms