Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 MIR4492-201ENST00000581627 80 ntBASIC14.85□□□□□ -0.03
APH1AQ96BI3 AC010327.4-202ENST00000591484 748 ntBASIC14.85□□□□□ -0.03
APH1AQ96BI3 C20orf181-201ENST00000623918 480 ntBASIC14.85□□□□□ -0.03
APH1AQ96BI3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 AC005915.1-201ENST00000624912 2018 ntBASIC14.85□□□□□ -0.03
APH1AQ96BI3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 AL391256.1-201ENST00000443260 1855 ntBASIC14.84□□□□□ -0.03
APH1AQ96BI3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 UPF3AP3-201ENST00000420996 769 ntBASIC14.84□□□□□ -0.03
APH1AQ96BI3 GPX1P2-201ENST00000429271 606 ntBASIC14.84□□□□□ -0.03
APH1AQ96BI3 FAM58CP-201ENST00000435741 640 ntBASIC14.84□□□□□ -0.03
APH1AQ96BI3 AC140658.5-201ENST00000438532 169 ntBASIC14.84□□□□□ -0.03
APH1AQ96BI3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
APH1AQ96BI3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 AC105020.1-201ENST00000435356 2205 ntBASIC14.84□□□□□ -0.03
APH1AQ96BI3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APH1AQ96BI3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
APH1AQ96BI3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.83□□□□□ -0.03
APH1AQ96BI3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
APH1AQ96BI3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
APH1AQ96BI3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
APH1AQ96BI3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
APH1AQ96BI3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
APH1AQ96BI3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
APH1AQ96BI3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 AC002056.1-201ENST00000395613 760 ntBASIC14.83□□□□□ -0.04
APH1AQ96BI3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 MIR1233-2-201ENST00000408138 82 ntBASIC14.83□□□□□ -0.04
APH1AQ96BI3 MIR1233-1-201ENST00000408722 82 ntBASIC14.83□□□□□ -0.04
APH1AQ96BI3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.83□□□□□ -0.04
APH1AQ96BI3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APH1AQ96BI3 AC005829.1-201ENST00000570002 483 ntBASIC14.83□□□□□ -0.04
APH1AQ96BI3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms