Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC051619.7-201ENST00000568314 623 ntBASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 UXT-AS1-201ENST00000590504 1525 ntBASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 WASH6P-202ENST00000359512 1437 ntBASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 AC069262.1-201ENST00000539058 672 ntBASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 AC087641.1-201ENST00000557561 1021 ntBASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 KRT8P23-201ENST00000560090 1207 ntBASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHKBP1Q8TBC3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 AC116353.5-201ENST00000638148 1699 ntBASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 AL035633.1-201ENST00000406139 838 ntBASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 AC084121.4-201ENST00000641598 221 ntBASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 AF228730.8-201ENST00000642140 221 ntBASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.55■□□□□ 0.4
SHKBP1Q8TBC3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms