Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 AP002490.2-201ENST00000524791 560 ntBASIC15.22■□□□□ 0.03
SHFQ7M4L6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 DBET-201ENST00000630918 3363 ntBASIC15.22■□□□□ 0.03
SHFQ7M4L6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHFQ7M4L6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.22■□□□□ 0.03
SHFQ7M4L6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 KRT18P1-202ENST00000452408 1331 ntBASIC15.21■□□□□ 0.03
SHFQ7M4L6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 AC091607.1-201ENST00000490318 1060 ntBASIC15.21■□□□□ 0.03
SHFQ7M4L6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 AP002414.2-201ENST00000591780 3365 ntBASIC15.21■□□□□ 0.03
SHFQ7M4L6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHFQ7M4L6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
SHFQ7M4L6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.21■□□□□ 0.02
SHFQ7M4L6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.21■□□□□ 0.02
SHFQ7M4L6 AC233702.3-201ENST00000578656 1387 ntBASIC15.21■□□□□ 0.02
SHFQ7M4L6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHFQ7M4L6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHFQ7M4L6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHFQ7M4L6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SHFQ7M4L6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SHFQ7M4L6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHFQ7M4L6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHFQ7M4L6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.21■□□□□ 0.02
SHFQ7M4L6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 TSSC2-201ENST00000450217 709 ntBASIC15.2■□□□□ 0.02
SHFQ7M4L6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 MINOS1P3-201ENST00000457048 203 ntBASIC15.2■□□□□ 0.02
SHFQ7M4L6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms