Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.57■□□□□ 0.88
DDR1Q08345 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
DDR1Q08345 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
DDR1Q08345 NEFHP1-201ENST00000412845 2629 ntBASIC20.57■□□□□ 0.88
DDR1Q08345 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
DDR1Q08345 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDR1Q08345 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DDR1Q08345 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.56■□□□□ 0.88
DDR1Q08345 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.56■□□□□ 0.88
DDR1Q08345 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDR1Q08345 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.56■□□□□ 0.88
DDR1Q08345 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.56■□□□□ 0.88
DDR1Q08345 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDR1Q08345 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.56■□□□□ 0.88
DDR1Q08345 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDR1Q08345 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.56■□□□□ 0.88
DDR1Q08345 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.56■□□□□ 0.88
DDR1Q08345 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.56■□□□□ 0.88
DDR1Q08345 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.56■□□□□ 0.88
DDR1Q08345 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.56■□□□□ 0.88
DDR1Q08345 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.56■□□□□ 0.88
DDR1Q08345 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.56■□□□□ 0.88
DDR1Q08345 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.56■□□□□ 0.88
DDR1Q08345 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.56■□□□□ 0.88
DDR1Q08345 AC061975.2-201ENST00000581722 295 ntBASIC20.56■□□□□ 0.88
DDR1Q08345 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.56■□□□□ 0.88
DDR1Q08345 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.56■□□□□ 0.88
DDR1Q08345 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.56■□□□□ 0.88
DDR1Q08345 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.56■□□□□ 0.88
DDR1Q08345 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDR1Q08345 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDR1Q08345 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
DDR1Q08345 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDR1Q08345 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
DDR1Q08345 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDR1Q08345 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
DDR1Q08345 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDR1Q08345 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDR1Q08345 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDR1Q08345 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.56■□□□□ 0.88
DDR1Q08345 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
DDR1Q08345 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDR1Q08345 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDR1Q08345 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.55■□□□□ 0.88
DDR1Q08345 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.55■□□□□ 0.88
DDR1Q08345 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
DDR1Q08345 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDR1Q08345 AC234783.1-201ENST00000441761 496 ntBASIC20.55■□□□□ 0.88
DDR1Q08345 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.55■□□□□ 0.88
DDR1Q08345 AP005482.1-201ENST00000563722 1273 ntBASIC20.55■□□□□ 0.88
DDR1Q08345 MIR4538-201ENST00000581377 78 ntBASIC20.55■□□□□ 0.88
DDR1Q08345 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
DDR1Q08345 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.55■□□□□ 0.88
DDR1Q08345 AC093726.1-201ENST00000608064 963 ntBASIC20.55■□□□□ 0.88
DDR1Q08345 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.55■□□□□ 0.88
DDR1Q08345 RPSAP52-203ENST00000622976 1023 ntBASIC20.55■□□□□ 0.88
DDR1Q08345 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDR1Q08345 NOC2LP1-202ENST00000452600 2235 ntBASIC20.55■□□□□ 0.88
DDR1Q08345 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDR1Q08345 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDR1Q08345 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.55■□□□□ 0.88
DDR1Q08345 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.55■□□□□ 0.88
DDR1Q08345 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDR1Q08345 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.54■□□□□ 0.88
DDR1Q08345 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.54■□□□□ 0.88
DDR1Q08345 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
DDR1Q08345 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.54■□□□□ 0.88
DDR1Q08345 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.54■□□□□ 0.88
DDR1Q08345 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.54■□□□□ 0.88
DDR1Q08345 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.54■□□□□ 0.88
DDR1Q08345 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 MEP1AP4-201ENST00000423244 1087 ntBASIC20.54■□□□□ 0.88
DDR1Q08345 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.54■□□□□ 0.88
DDR1Q08345 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.54■□□□□ 0.88
DDR1Q08345 AC007389.4-201ENST00000454674 793 ntBASIC20.54■□□□□ 0.88
DDR1Q08345 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.54■□□□□ 0.88
DDR1Q08345 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.54■□□□□ 0.88
DDR1Q08345 AC133552.6-201ENST00000613406 534 ntBASIC20.54■□□□□ 0.88
DDR1Q08345 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.54■□□□□ 0.88
DDR1Q08345 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.54■□□□□ 0.88
DDR1Q08345 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.54■□□□□ 0.88
DDR1Q08345 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
DDR1Q08345 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms