Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.51■□□□□ 0.23
LIMK1P53667 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.51■□□□□ 0.23
LIMK1P53667 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.51■□□□□ 0.23
LIMK1P53667 AL138828.2-201ENST00000615812 383 ntBASIC16.51■□□□□ 0.23
LIMK1P53667 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.51■□□□□ 0.23
LIMK1P53667 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LIMK1P53667 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
LIMK1P53667 IGHV3-72-202ENST00000621503 303 ntBASIC16.51■□□□□ 0.23
LIMK1P53667 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK1P53667 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LIMK1P53667 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK1P53667 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.51■□□□□ 0.23
LIMK1P53667 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK1P53667 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK1P53667 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK1P53667 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LIMK1P53667 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
LIMK1P53667 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK1P53667 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.51■□□□□ 0.23
LIMK1P53667 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK1P53667 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.5■□□□□ 0.23
LIMK1P53667 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 AC012569.1-201ENST00000591191 1524 ntBASIC16.5■□□□□ 0.23
LIMK1P53667 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LIMK1P53667 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 AL135999.2-201ENST00000622438 1686 ntBASIC16.5■□□□□ 0.23
LIMK1P53667 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LIMK1P53667 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.5■□□□□ 0.23
LIMK1P53667 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LIMK1P53667 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LIMK1P53667 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.5■□□□□ 0.23
LIMK1P53667 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.5■□□□□ 0.23
LIMK1P53667 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.5■□□□□ 0.23
LIMK1P53667 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LIMK1P53667 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.5■□□□□ 0.23
LIMK1P53667 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK1P53667 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK1P53667 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.5■□□□□ 0.23
LIMK1P53667 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.5■□□□□ 0.23
LIMK1P53667 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.5■□□□□ 0.23
LIMK1P53667 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK1P53667 AC018529.1-201ENST00000613063 361 ntBASIC16.5■□□□□ 0.23
LIMK1P53667 AC007967.4-201ENST00000614700 386 ntBASIC16.5■□□□□ 0.23
LIMK1P53667 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK1P53667 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LIMK1P53667 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LIMK1P53667 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK1P53667 AL139384.1-201ENST00000612143 3047 ntBASIC16.5■□□□□ 0.23
LIMK1P53667 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK1P53667 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LIMK1P53667 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK1P53667 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.5■□□□□ 0.23
LIMK1P53667 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LIMK1P53667 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
LIMK1P53667 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.49■□□□□ 0.23
LIMK1P53667 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
LIMK1P53667 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LIMK1P53667 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 AC007541.1-201ENST00000570282 1469 ntBASIC16.49■□□□□ 0.23
LIMK1P53667 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.49■□□□□ 0.23
LIMK1P53667 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.49■□□□□ 0.23
LIMK1P53667 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.49■□□□□ 0.23
LIMK1P53667 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LIMK1P53667 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
LIMK1P53667 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 AL512384.1-201ENST00000406683 331 ntBASIC16.49■□□□□ 0.23
LIMK1P53667 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK1P53667 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.49■□□□□ 0.23
LIMK1P53667 AP006294.1-201ENST00000415407 339 ntBASIC16.49■□□□□ 0.23
LIMK1P53667 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms