Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RXRBP28702 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RXRBP28702 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RXRBP28702 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RXRBP28702 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.57■■□□□ 1.04
RXRBP28702 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.57■■□□□ 1.04
RXRBP28702 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
RXRBP28702 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RXRBP28702 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 AL031598.1-201ENST00000561511 1773 ntBASIC21.57■■□□□ 1.04
RXRBP28702 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC21.57■■□□□ 1.04
RXRBP28702 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 RN7SL720P-201ENST00000488178 304 ntBASIC21.57■■□□□ 1.04
RXRBP28702 FTLP10-202ENST00000505798 471 ntBASIC21.57■■□□□ 1.04
RXRBP28702 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
RXRBP28702 AC009486.1-201ENST00000569860 813 ntBASIC21.57■■□□□ 1.04
RXRBP28702 NAT9-222ENST00000583476 583 ntTSL 3 BASIC21.57■■□□□ 1.04
RXRBP28702 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 AL049840.4-201ENST00000602422 811 ntBASIC21.57■■□□□ 1.04
RXRBP28702 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
RXRBP28702 AC091812.3-201ENST00000621362 345 ntBASIC21.57■■□□□ 1.04
RXRBP28702 LINC01451-201ENST00000623792 534 ntBASIC21.57■■□□□ 1.04
RXRBP28702 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
RXRBP28702 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RXRBP28702 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RXRBP28702 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC21.56■■□□□ 1.04
RXRBP28702 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.56■■□□□ 1.04
RXRBP28702 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.56■■□□□ 1.04
RXRBP28702 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RXRBP28702 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.56■■□□□ 1.04
RXRBP28702 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 SOCS2P1-201ENST00000417727 557 ntBASIC21.56■■□□□ 1.04
RXRBP28702 ATP6V0CP2-201ENST00000469409 207 ntBASIC21.56■■□□□ 1.04
RXRBP28702 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC21.56■■□□□ 1.04
RXRBP28702 AC245884.6-201ENST00000515672 1067 ntBASIC21.56■■□□□ 1.04
RXRBP28702 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.56■■□□□ 1.04
RXRBP28702 EEF1DP1-201ENST00000585891 896 ntBASIC21.56■■□□□ 1.04
RXRBP28702 BRI3BPP1-201ENST00000594224 787 ntBASIC21.56■■□□□ 1.04
RXRBP28702 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.56■■□□□ 1.04
RXRBP28702 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.56■■□□□ 1.04
RXRBP28702 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
RXRBP28702 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.56■■□□□ 1.04
RXRBP28702 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RXRBP28702 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.56■■□□□ 1.04
RXRBP28702 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.56■■□□□ 1.04
RXRBP28702 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RXRBP28702 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RXRBP28702 AC134312.5-201ENST00000568031 1313 ntBASIC21.55■■□□□ 1.04
RXRBP28702 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RXRBP28702 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC21.55■■□□□ 1.04
RXRBP28702 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RXRBP28702 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC21.55■■□□□ 1.04
RXRBP28702 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.55■■□□□ 1.04
RXRBP28702 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RXRBP28702 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC21.55■■□□□ 1.04
RXRBP28702 KRTAP19-9P-201ENST00000421795 191 ntBASIC21.55■■□□□ 1.04
RXRBP28702 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RXRBP28702 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC21.55■■□□□ 1.04
RXRBP28702 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC21.55■■□□□ 1.04
RXRBP28702 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RXRBP28702 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC21.55■■□□□ 1.04
RXRBP28702 AC061975.2-201ENST00000581722 295 ntBASIC21.55■■□□□ 1.04
RXRBP28702 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
RXRBP28702 AL353726.2-201ENST00000623259 884 ntBASIC21.55■■□□□ 1.04
RXRBP28702 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC21.55■■□□□ 1.04
RXRBP28702 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RXRBP28702 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RXRBP28702 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.55■■□□□ 1.04
RXRBP28702 KRT8P49-201ENST00000604166 1432 ntBASIC21.55■■□□□ 1.04
RXRBP28702 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RXRBP28702 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RXRBP28702 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC21.54■■□□□ 1.04
RXRBP28702 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RXRBP28702 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RXRBP28702 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms