Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.66■□□□□ 0.26
PDGFBP01127 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.66■□□□□ 0.26
PDGFBP01127 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.66■□□□□ 0.26
PDGFBP01127 KRT8P49-201ENST00000604166 1432 ntBASIC16.66■□□□□ 0.26
PDGFBP01127 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.66■□□□□ 0.26
PDGFBP01127 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFBP01127 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PDGFBP01127 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.66■□□□□ 0.26
PDGFBP01127 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PDGFBP01127 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFBP01127 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFBP01127 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFBP01127 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFBP01127 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.66■□□□□ 0.26
PDGFBP01127 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFBP01127 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFBP01127 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.65■□□□□ 0.26
PDGFBP01127 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.65■□□□□ 0.26
PDGFBP01127 KRT8P12-202ENST00000472924 1397 ntBASIC16.65■□□□□ 0.26
PDGFBP01127 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PDGFBP01127 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PDGFBP01127 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDGFBP01127 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDGFBP01127 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.65■□□□□ 0.26
PDGFBP01127 RNA5SP423-201ENST00000517127 109 ntBASIC16.65■□□□□ 0.26
PDGFBP01127 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.65■□□□□ 0.26
PDGFBP01127 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.65■□□□□ 0.26
PDGFBP01127 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.65■□□□□ 0.26
PDGFBP01127 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.65■□□□□ 0.26
PDGFBP01127 AC243960.2-201ENST00000600996 747 ntBASIC16.65■□□□□ 0.26
PDGFBP01127 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.65■□□□□ 0.26
PDGFBP01127 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.65■□□□□ 0.26
PDGFBP01127 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDGFBP01127 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PDGFBP01127 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.64■□□□□ 0.26
PDGFBP01127 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.64■□□□□ 0.26
PDGFBP01127 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PDGFBP01127 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PDGFBP01127 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
PDGFBP01127 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.64■□□□□ 0.25
PDGFBP01127 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PDGFBP01127 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.64■□□□□ 0.25
PDGFBP01127 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.64■□□□□ 0.25
PDGFBP01127 AC007551.1-201ENST00000457394 519 ntBASIC16.64■□□□□ 0.25
PDGFBP01127 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.64■□□□□ 0.25
PDGFBP01127 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.64■□□□□ 0.25
PDGFBP01127 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.64■□□□□ 0.25
PDGFBP01127 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.64■□□□□ 0.25
PDGFBP01127 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.64■□□□□ 0.25
PDGFBP01127 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.64■□□□□ 0.25
PDGFBP01127 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PDGFBP01127 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.64■□□□□ 0.25
PDGFBP01127 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.64■□□□□ 0.25
PDGFBP01127 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PDGFBP01127 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.64■□□□□ 0.25
PDGFBP01127 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.64■□□□□ 0.25
PDGFBP01127 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFBP01127 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.63■□□□□ 0.25
PDGFBP01127 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 MIR1247-201ENST00000408206 136 ntBASIC16.63■□□□□ 0.25
PDGFBP01127 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.63■□□□□ 0.25
PDGFBP01127 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PDGFBP01127 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.63■□□□□ 0.25
PDGFBP01127 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.63■□□□□ 0.25
PDGFBP01127 RNA5SP412-201ENST00000516234 123 ntBASIC16.63■□□□□ 0.25
PDGFBP01127 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
PDGFBP01127 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.63■□□□□ 0.25
PDGFBP01127 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.63■□□□□ 0.25
PDGFBP01127 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.63■□□□□ 0.25
PDGFBP01127 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms