Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA3Q9Y5H0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA3Q9Y5H0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA3Q9Y5H0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA3Q9Y5H0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA3Q9Y5H0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA3Q9Y5H0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA3Q9Y5H0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA3Q9Y5H0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 AC027612.4-201ENST00000605371 583 ntBASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 AC091812.2-201ENST00000619081 385 ntBASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA3Q9Y5H0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 MIR3197-201ENST00000582241 73 ntBASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 AC068137.2-201ENST00000605408 478 ntBASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 AL513210.1-201ENST00000629608 234 ntBASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA3Q9Y5H0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA3Q9Y5H0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 271 ms