Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 AL136317.3-201ENST00000618497 906 ntBASIC18.13■□□□□ 0.49
USP15Q9Y4E8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP15Q9Y4E8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 BASP1P1-201ENST00000430708 665 ntBASIC18.12■□□□□ 0.49
USP15Q9Y4E8 AC055876.3-201ENST00000431496 288 ntBASIC18.12■□□□□ 0.49
USP15Q9Y4E8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 AC002472.2-201ENST00000442739 958 ntBASIC18.12■□□□□ 0.49
USP15Q9Y4E8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 AC026120.1-201ENST00000611536 926 ntBASIC18.12■□□□□ 0.49
USP15Q9Y4E8 AC138649.4-201ENST00000612222 287 ntBASIC18.12■□□□□ 0.49
USP15Q9Y4E8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP15Q9Y4E8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 AC002056.1-201ENST00000395613 760 ntBASIC18.11■□□□□ 0.49
USP15Q9Y4E8 AL355306.1-201ENST00000415580 579 ntBASIC18.11■□□□□ 0.49
USP15Q9Y4E8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.11■□□□□ 0.49
USP15Q9Y4E8 ACTL9-202ENST00000612068 1252 ntBASIC18.11■□□□□ 0.49
USP15Q9Y4E8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 KRT18P55-202ENST00000578578 1546 ntBASIC18.11■□□□□ 0.49
USP15Q9Y4E8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
USP15Q9Y4E8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms