Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 AC069335.1-201ENST00000489972 472 ntBASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 AC079140.1-201ENST00000508039 487 ntBASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSX2IPQ9Y2D8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 HCG4-201ENST00000418983 998 ntBASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 CNN2P2-201ENST00000443536 909 ntBASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 CNN2P3-201ENST00000450201 906 ntBASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 RNA5SP421-201ENST00000516864 134 ntBASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 AL135744.1-201ENST00000565098 629 ntBASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 AL136317.3-201ENST00000618497 906 ntBASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 AL353732.1-201ENST00000569618 1459 ntBASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 AC124067.4-201ENST00000519691 2379 ntBASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSX2IPQ9Y2D8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 AC099398.1-201ENST00000567919 2776 ntBASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 HMGA1P7-201ENST00000406908 502 ntBASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 KRT18P32-201ENST00000424695 1287 ntBASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 AL512356.2-201ENST00000546955 174 ntBASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 KRT8P23-201ENST00000560090 1207 ntBASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 AC093520.2-201ENST00000561830 333 ntBASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SSX2IPQ9Y2D8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SSX2IPQ9Y2D8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
SSX2IPQ9Y2D8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SSX2IPQ9Y2D8 AC106820.2-201ENST00000563775 3264 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms