Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 MIR940-201ENST00000401276 94 ntBASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 AL031432.2-201ENST00000566714 459 ntBASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 AL928711.1-201ENST00000570165 459 ntBASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 AC010507.1-201ENST00000633895 436 ntBASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB42Q8N4Z0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 AC006277.1-201ENST00000624348 1610 ntBASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 PCDHB17P-201ENST00000539533 2393 ntBASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 AL391256.1-201ENST00000443260 1855 ntBASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 IGLL3P-201ENST00000412472 434 ntBASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 ACTL9-202ENST00000612068 1252 ntBASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB42Q8N4Z0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
RAB42Q8N4Z0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.33■□□□□ 0.21
RAB42Q8N4Z0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB42Q8N4Z0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB42Q8N4Z0 AC005915.1-201ENST00000624912 2018 ntBASIC16.33■□□□□ 0.21
RAB42Q8N4Z0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB42Q8N4Z0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB42Q8N4Z0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 AC105020.1-201ENST00000435356 2205 ntBASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 RHOQP3-201ENST00000437982 621 ntBASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
RAB42Q8N4Z0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms