Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.56■□□□□ 0.24
CDKL1Q00532 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKL1Q00532 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.56■□□□□ 0.24
CDKL1Q00532 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKL1Q00532 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.56■□□□□ 0.24
CDKL1Q00532 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CDKL1Q00532 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.56■□□□□ 0.24
CDKL1Q00532 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.56■□□□□ 0.24
CDKL1Q00532 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.56■□□□□ 0.24
CDKL1Q00532 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDKL1Q00532 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDKL1Q00532 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CDKL1Q00532 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDKL1Q00532 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKL1Q00532 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDKL1Q00532 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL1Q00532 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKL1Q00532 AL662844.4-201ENST00000606367 2838 ntBASIC16.55■□□□□ 0.24
CDKL1Q00532 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKL1Q00532 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKL1Q00532 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKL1Q00532 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDKL1Q00532 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDKL1Q00532 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKL1Q00532 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CDKL1Q00532 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKL1Q00532 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 PTCHD3P3-201ENST00000403073 906 ntBASIC16.55■□□□□ 0.24
CDKL1Q00532 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.55■□□□□ 0.24
CDKL1Q00532 KRT18P27-201ENST00000427733 1299 ntBASIC16.55■□□□□ 0.24
CDKL1Q00532 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKL1Q00532 DUSP5P1-201ENST00000441325 1139 ntBASIC16.55■□□□□ 0.24
CDKL1Q00532 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKL1Q00532 AC073648.2-201ENST00000510116 352 ntBASIC16.55■□□□□ 0.24
CDKL1Q00532 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.55■□□□□ 0.24
CDKL1Q00532 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKL1Q00532 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDKL1Q00532 AC013467.2-201ENST00000605472 835 ntBASIC16.55■□□□□ 0.24
CDKL1Q00532 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDKL1Q00532 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CDKL1Q00532 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKL1Q00532 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDKL1Q00532 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKL1Q00532 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDKL1Q00532 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
CDKL1Q00532 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL1Q00532 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL1Q00532 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL1Q00532 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDKL1Q00532 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKL1Q00532 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CDKL1Q00532 TOP3BP1-201ENST00000420768 1380 ntBASIC16.54■□□□□ 0.24
CDKL1Q00532 AL645728.1-201ENST00000366221 2101 ntBASIC16.54■□□□□ 0.24
CDKL1Q00532 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL1Q00532 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKL1Q00532 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL1Q00532 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL1Q00532 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDKL1Q00532 ELK2BP-201ENST00000415014 1224 ntBASIC16.54■□□□□ 0.24
CDKL1Q00532 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL1Q00532 OR7E14P-202ENST00000530490 1290 ntBASIC16.54■□□□□ 0.24
CDKL1Q00532 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.54■□□□□ 0.24
CDKL1Q00532 AL121912.1-201ENST00000603683 238 ntBASIC16.54■□□□□ 0.24
CDKL1Q00532 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.54■□□□□ 0.24
CDKL1Q00532 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL1Q00532 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL1Q00532 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDKL1Q00532 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.54■□□□□ 0.24
CDKL1Q00532 AC006504.4-201ENST00000592118 1568 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms